Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 9.9e-68 260.0 132 100.0
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 1.2e-20 103.6 173 40.5
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 1.4e-18 96.7 104 51.9
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 2.5e-18 95.9 127 47.2
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 1.8e-16 89.7 132 42.4
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 4.8e-14 81.6 48 85.4
CSS0009678 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 1.1e-13 80.5 122 41.0
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 2.4e-13 79.3 45 86.7
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.4e-13 79.3 45 86.7
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 1.6e-12 76.6 45 82.2
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 7.7e-12 74.3 45 80.0
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 6.5e-11 71.2 42 78.6
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 6.5e-11 71.2 46 73.9
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 7.2e-10 67.8 37 91.9
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 7.2e-10 67.8 169 28.4
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.2e-09 67.0 45 68.9
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 2.7e-09 65.9 37 89.2
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 3.6e-09 65.5 36 88.9
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 3.6e-09 65.5 36 88.9
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 1.0e-08 63.9 45 71.1
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 1.0e-08 63.9 37 86.5
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.4e-08 63.5 37 86.5
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.8e-08 63.2 38 84.2
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.8e-08 63.2 38 84.2
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 2.3e-08 62.8 34 88.2
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 3.0e-08 62.4 39 74.4
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 3.0e-08 62.4 36 83.3
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 5.2e-08 61.6 43 60.5
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 8.8e-08 60.8 35 80.0
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 8.8e-08 60.8 38 76.3
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 1.5e-07 60.1 36 83.3
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 1.5e-07 60.1 36 83.3
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 1.5e-07 60.1 41 75.6
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 1.5e-07 60.1 35 85.7
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 1.5e-07 60.1 35 82.9
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 4.4e-07 58.5 34 82.4
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 4.4e-07 58.5 35 77.1
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 4.4e-07 58.5 35 77.1
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 4.4e-07 58.5 36 77.8
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 5.7e-07 58.2 35 74.3
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 5.7e-07 58.2 35 74.3
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 9.7e-07 57.4 34 82.4
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 1.3e-06 57.0 36 80.6
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 2.2e-06 56.2 32 78.1
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 2.8e-06 55.8 135 31.1
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 6.3e-06 54.7 35 68.6
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 6.3e-06 54.7 35 71.4


User provided reference genes

Program Settings