Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g29190 Schrenkiella parvula HOM05D000034 ORTHO05D000037 2.7e-103 378.6 187 100.0
AL5G20880 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 4.7e-47 191.8 268 44.0
BolC2t08059H Brassica oleracea HOM05D000034 ORTHO05D000037 5.9e-42 174.9 264 42.4
AT1G43722 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 1.2e-39 167.2 227 44.5
BcaC01g00381 Brassica carinata HOM05D000034 ORTHO05D000037 1.2e-39 167.2 227 43.6
C02p19270 Brassica napus HOM05D000034 ORTHO05D000037 4.7e-39 165.2 227 43.2
C05p15550 Brassica napus HOM05D000034 ORTHO05D000037 4.7e-39 165.2 227 43.6
C02p00030 Brassica napus HOM05D000034 ORTHO05D000037 1.4e-38 163.7 227 43.2
C07p15910 Brassica napus HOM05D000034 ORTHO05D000037 1.4e-38 163.7 227 43.2
BraA10t43212Z Brassica rapa HOM05D000034 ORTHO05D000037 1.4e-38 163.7 227 43.2
BolC3t20396H Brassica oleracea HOM05D000034 ORTHO05D000037 4.0e-38 162.2 227 43.2
BolC5t32760H Brassica oleracea HOM05D000034 ORTHO05D000037 6.8e-38 161.4 264 40.2
C03p81310 Brassica napus HOM05D000034 ORTHO05D000037 3.4e-37 159.1 227 42.7
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 2.7e-34 149.4 264 38.3
C05p40170 Brassica napus HOM05D000034 ORTHO05D000037 6.6e-33 144.8 264 38.6
Sp4g09120 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.2e-29 134.0 194 45.4
Sp2g07600 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.5e-29 133.7 161 47.8
Sp3g24730 Schrenkiella parvula HOM05D000034 ORTHO05D000037 2.0e-26 123.2 192 42.2
BolC1t02225H Brassica oleracea HOM05D000034 ORTHO05D000037 3.5e-26 122.5 232 37.1
A03p38980 Brassica napus HOM05D000034 ORTHO05D000037 1.0e-25 120.9 104 64.4
BraA06t25714Z Brassica rapa HOM05D000034 ORTHO05D000037 4.3e-24 115.5 72 76.4
C03p63410 Brassica napus HOM05D000034 ORTHO05D000037 8.1e-23 111.3 104 60.6
BolC3t17229H Brassica oleracea HOM05D000034 ORTHO05D000037 1.8e-22 110.2 195 37.9
BolC8t50526H Brassica oleracea HOM05D000034 ORTHO05D000037 2.0e-21 106.7 104 52.9
AT3G30525 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 1.7e-20 103.6 112 54.5
A09p29760 Brassica napus HOM05D000034 ORTHO05D000037 1.7e-20 103.6 104 52.9
BolC3t20705H Brassica oleracea HOM05D000034 ORTHO05D000037 6.4e-20 101.7 104 52.9
BolC7t42084H Brassica oleracea HOM05D000034 ORTHO05D000037 8.3e-20 101.3 104 52.9
C02p35730 Brassica napus HOM05D000034 ORTHO05D000037 2.4e-19 99.8 274 28.1
BolC2t12232H Brassica oleracea HOM05D000034 ORTHO05D000037 1.2e-18 97.4 97 52.6
BolC4t24236H Brassica oleracea HOM05D000034 ORTHO05D000037 2.7e-18 96.3 104 52.9
C02p34440 Brassica napus HOM05D000034 ORTHO05D000037 4.6e-18 95.5 198 30.8
BolC4t22216H Brassica oleracea HOM05D000034 ORTHO05D000037 4.6e-18 95.5 104 49.0
BraA06t25865Z Brassica rapa HOM05D000034 ORTHO05D000037 4.6e-18 95.5 103 51.5
A09p34710 Brassica napus HOM05D004101 ORTHO05D005221 1.7e-17 93.6 260 28.1
BraSC36t46074Z Brassica rapa HOM05D000034 ORTHO05D000037 1.7e-17 93.6 67 65.7
BolC4t25348H Brassica oleracea HOM05D000034 ORTHO05D000037 3.0e-17 92.8 104 47.1
BraA04t16762Z Brassica rapa HOM05D000034 ORTHO05D000037 5.6e-16 88.6 99 49.5
AT5G28730 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 8.1e-15 84.7 176 33.0
A06p20510 Brassica napus HOM05D000034 ORTHO05D000037 2.3e-14 83.2 62 61.3
BcaB07g31059 Brassica carinata HOM05D008982 ORTHO05D011553 5.8e-13 78.6 75 49.3
BcaB01g04952 Brassica carinata HOM05D008982 ORTHO05D011553 7.6e-13 78.2 86 46.5
BcaB02g11076 Brassica carinata HOM05D008982 ORTHO05D011553 7.6e-13 78.2 86 46.5
A04p08150 Brassica napus HOM05D000034 ORTHO05D000037 3.7e-12 75.9 210 27.6
BraA04t16505Z Brassica rapa HOM05D000034 ORTHO05D000037 3.7e-12 75.9 210 27.6
Sp4g10210 Schrenkiella parvula HOM05D000034 ORTHO05D000037 3.7e-12 75.9 72 59.7
A03p67230 Brassica napus HOM05D000034 ORTHO05D000037 4.9e-12 75.5 68 50.0
BcaC01g01276 Brassica carinata HOM05D000034 ORTHO05D000037 7.1e-11 71.6 221 27.6
BcaC03g17872 Brassica carinata HOM05D008982 ORTHO05D011553 7.1e-11 71.6 68 50.0
Sp7g08920 Schrenkiella parvula HOM05D040628 ORTHO05D000037 9.2e-11 71.2 52 65.4
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.2e-10 70.9 141 34.8
Sabra15G0031700 Salix brachista HOM05D000034 ORTHO05D000037 6.0e-10 68.6 186 30.1
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 6.0e-10 68.6 48 68.8
C05p34990 Brassica napus HOM05D000034 ORTHO05D000037 7.8e-10 68.2 102 40.2
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-09 67.8 200 29.0
A02p43830 Brassica napus HOM05D000034 ORTHO05D000037 1.5e-08 63.9 79 45.6
BraA04t16861Z Brassica rapa HOM05D008982 ORTHO05D011553 1.5e-08 63.9 53 50.9
A01p37390 Brassica napus HOM05D000034 ORTHO05D000037 1.9e-08 63.5 104 38.5
BraA02t07653Z Brassica rapa HOM05D008982 ORTHO05D000037 2.5e-08 63.2 51 60.8
arahy.Tifrunner.gnm1.ann1.FATU7S Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-07 60.8 115 33.9
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.2e-07 60.8 168 28.6
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.2e-07 60.8 168 28.6
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.2e-07 60.8 189 29.1
Thhalv10015872m.g Eutrema salsugineum HOM05D000034 ORTHO05D000037 1.6e-07 60.5 67 44.8
C05p32130 Brassica napus HOM05D017243 ORTHO05D018784 2.1e-07 60.1 98 38.8
BolC2t09476H Brassica oleracea HOM05D000034 ORTHO05D000037 2.1e-07 60.1 65 44.6
BcaB05g23950 Brassica carinata HOM05D000034 ORTHO05D000037 2.8e-07 59.7 67 47.8
Nn7g37677 Nelumbo nucifera HOM05D000034 ORTHO05D000037 2.8e-07 59.7 97 40.2
BcaC01g06241 Brassica carinata HOM05D000034 ORTHO05D000037 3.6e-07 59.3 67 47.8
BcaC08g43145 Brassica carinata HOM05D000034 ORTHO05D000037 4.7e-07 58.9 67 47.8
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.2e-07 58.5 192 26.6
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-06 57.8 86 39.5
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-06 57.8 86 39.5
TWI75G0521 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-06 57.8 86 39.5
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.4e-06 57.4 211 27.0
Hma1.2p1_1839F.1_g304890 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.0 179 28.5
BcaC09g51914 Brassica carinata HOM05D008982 ORTHO05D011553 2.4e-06 56.6 45 55.6
TWI59G1468 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.4e-06 56.6 86 39.5
BcaB04g16972 Brassica carinata HOM05D000034 ORTHO05D000037 3.1e-06 56.2 67 46.3
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 3.1e-06 56.2 261 26.1
Ah.05g173950 Amaranthus hybridus HOM05D000034 ORTHO05D000037 4.0e-06 55.8 81 34.6
Cc06_g08990 Coffea canephora HOM05D000034 ORTHO05D000037 4.0e-06 55.8 219 26.0
Hma1.2p1_0529F.1_g173210 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.0e-06 55.8 169 30.2
Prupe.7G000100 Prunus persica HOM05D000034 ORTHO05D000037 4.0e-06 55.8 232 26.3
Atru.chr13.2070 Acer truncatum HOM05D000034 ORTHO05D000037 5.2e-06 55.5 168 28.0
C04p69020 Brassica napus HOM05D000034 ORTHO05D000037 5.2e-06 55.5 226 25.2
QL10p037558 Quercus lobata HOM05D000034 ORTHO05D000037 5.2e-06 55.5 86 39.5
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.2e-06 55.5 68 44.1
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 8.9e-06 54.7 86 39.5
Dinv01664 Davidia involucrata HOM05D000034 ORTHO05D000037 8.9e-06 54.7 99 37.4
MBI13_g01848_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.9e-06 54.7 147 30.6
Sabra12G0031900 Salix brachista HOM05D000034 ORTHO05D000037 8.9e-06 54.7 178 28.7
TWI34G1515 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.9e-06 54.7 86 38.4


User provided reference genes

Program Settings