Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 8.2e-117 423.7 209 100.0
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.7e-101 372.9 209 89.0
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.3e-98 363.2 208 87.0
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.3e-98 363.2 208 87.0
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.3e-98 363.2 208 87.0
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.2e-98 362.5 208 86.5
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.1e-97 360.1 208 86.1
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 2.3e-95 352.4 208 86.1
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 9.7e-94 347.1 212 84.0
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 3.7e-93 345.1 208 86.1
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 8.3e-93 344.0 210 83.3
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.2e-88 330.1 214 77.6
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 2.6e-86 322.4 167 93.4
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 8.6e-82 307.4 212 70.8
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 5.0e-66 255.0 217 62.2
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.8e-63 246.5 209 59.3
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.3e-61 240.4 209 60.3
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.7e-61 240.0 215 61.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 6.4e-61 238.0 209 62.2
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.4e-60 236.9 209 61.7
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 3.2e-60 235.7 213 59.6
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 4.1e-60 235.3 216 58.8
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 7.0e-60 234.6 209 61.2
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.2e-59 233.8 187 64.7
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.6e-59 233.4 183 63.9
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.6e-59 233.4 211 60.7
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.1e-59 233.0 209 57.4
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 2.7e-59 232.6 180 63.9
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 7.8e-59 231.1 219 55.7
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.0e-58 230.7 207 57.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 1.3e-58 230.3 211 57.3
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.7e-58 229.9 178 60.1
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 3.0e-58 229.2 211 56.9
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.0e-58 229.2 179 64.2
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.9e-58 228.8 183 56.8
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.9e-58 228.8 213 55.9
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 3.9e-58 228.8 209 57.9
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 5.1e-58 228.4 184 62.0
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 6.6e-58 228.0 180 58.9
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 8.6e-58 227.6 177 63.3
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.1e-57 227.3 209 56.9
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.5e-57 226.9 209 57.4
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.5e-57 226.9 211 57.8
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.5e-57 226.9 180 63.3
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.9e-57 226.5 203 57.1
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.5e-57 226.1 175 64.0
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 4.3e-57 225.3 175 64.0
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 4.3e-57 225.3 213 58.2
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 4.3e-57 225.3 175 65.1
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 5.6e-57 224.9 175 64.0
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 5.6e-57 224.9 208 55.8
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.1e-56 223.0 184 58.7
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 2.8e-56 222.6 198 58.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 3.6e-56 222.2 212 55.7
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 3.6e-56 222.2 175 62.9
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 6.2e-56 221.5 208 55.3
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 8.1e-56 221.1 210 56.7
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 1.4e-55 220.3 173 63.0
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 2.3e-55 219.5 234 51.3
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.3e-55 219.5 208 54.8
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.3e-55 219.5 168 63.1
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.1e-55 219.2 180 59.4
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 6.8e-55 218.0 213 54.5
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 6.8e-55 218.0 175 61.7
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 6.8e-55 218.0 217 57.6
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 6.8e-55 218.0 177 63.8
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.2e-54 217.2 208 53.8
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.5e-54 216.9 172 60.5
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.5e-54 216.9 203 55.2
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 2.0e-54 216.5 176 60.8
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 2.6e-54 216.1 178 60.1
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 3.4e-54 215.7 203 56.2
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 4.4e-54 215.3 184 57.1
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.4e-54 215.3 171 62.0
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 5.8e-54 214.9 176 60.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.3e-53 213.8 178 60.7
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.7e-53 213.4 205 54.1
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 2.2e-53 213.0 185 58.9
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 4.9e-53 211.8 207 52.2
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.9e-53 211.8 197 55.3
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 8.3e-53 211.1 218 51.8
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 8.3e-53 211.1 178 57.9
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 8.3e-53 211.1 182 59.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.1e-52 210.7 233 51.5
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.1e-52 210.7 182 59.9
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 1.4e-52 210.3 208 52.9
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.2e-52 209.1 208 51.4
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 3.2e-52 209.1 176 60.2
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.6e-51 206.8 175 58.9
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 3.5e-51 205.7 204 52.9
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 4.6e-51 205.3 200 56.0
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 3.0e-50 202.6 223 52.0
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 3.0e-50 202.6 168 59.5
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.6e-50 201.4 208 51.4
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 2.1e-48 196.4 162 62.3
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.1e-47 192.6 148 62.2
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 5.8e-46 188.3 182 53.8
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.7e-45 186.8 203 51.2
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 2.9e-45 186.0 201 50.2
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 6.4e-45 184.9 227 47.1
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 8.4e-45 184.5 190 50.5
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.7e-43 179.5 196 48.0
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 4.6e-35 152.1 169 48.5
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 6.0e-35 151.8 196 44.4
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 3.3e-33 146.0 213 39.9
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 8.1e-32 141.4 214 39.3
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.3e-29 134.0 164 45.1
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.7e-29 133.7 117 58.1
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 2.2e-29 133.3 240 37.1
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 2.9e-29 132.9 161 44.7
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 5.3e-23 112.1 198 34.8
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 2.6e-22 109.8 102 52.9
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.0e-21 107.8 185 34.1
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.2e-21 106.7 185 35.1
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 3.2e-20 102.8 93 55.9
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 2.7e-19 99.8 197 31.5
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 1.1e-15 87.8 105 49.5
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 1.1e-15 87.8 186 33.9
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.0e-13 81.3 182 29.7
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 1.2e-11 74.3 104 42.3
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.2e-06 57.8 105 32.4


User provided reference genes

Program Settings