Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g26470 Schrenkiella parvula HOM05D000003 ORTHO05D020833 3.0e-254 881.3 437 100.0
C03p46280 Brassica napus HOM05D000003 ORTHO05D018798 2.4e-17 94.4 105 45.7
BcaC01g00005 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-13 81.3 216 28.7
BcaC08g43569 Brassica carinata HOM05D000003 ORTHO05D000006 7.9e-13 79.3 249 25.3
BolC8t47081H Brassica oleracea HOM05D029514 ORTHO05D018798 7.9e-13 79.3 102 40.2
BolC6t36740H Brassica oleracea HOM05D000003 ORTHO05D000006 1.8e-12 78.2 103 38.8
BcaC05g29078 Brassica carinata HOM05D000003 ORTHO05D000283 3.9e-12 77.0 224 29.5
BolC9t54435H Brassica oleracea HOM05D000003 ORTHO05D000006 3.9e-12 77.0 103 38.8
BcaC05g27494 Brassica carinata HOM05D000003 ORTHO05D000283 5.1e-12 76.6 224 29.9
BcaC07g37299 Brassica carinata HOM05D000003 ORTHO05D000283 5.1e-12 76.6 231 29.0
BcaB05g22562 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-11 75.5 226 27.0
Aa31sc2092G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 7.4e-11 72.8 99 35.4
BolC7t40735H Brassica oleracea HOM05D000003 ORTHO05D000006 4.8e-10 70.1 104 33.7
BolC2t10005H Brassica oleracea HOM05D000848 ORTHO05D000007 1.4e-09 68.6 102 38.2
BolC5t30646H Brassica oleracea HOM05D000003 ORTHO05D000283 1.8e-09 68.2 178 28.7
THA.LOC104800051 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.4e-09 67.8 101 38.6
BcaC07g40616 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-09 67.4 218 28.0
BcaB01g01827 Brassica carinata HOM05D003728 ORTHO05D000006 5.3e-09 66.6 121 32.2
BcaB04g19531 Brassica carinata HOM05D000003 ORTHO05D000006 5.3e-09 66.6 139 31.7
Dinv06456 Davidia involucrata HOM05D000003 ORTHO05D000006 6.9e-09 66.2 115 34.8
THA.LOC104824202 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 6.9e-09 66.2 141 31.2
BraA01t03805Z Brassica rapa HOM05D000003 ORTHO05D000006 9.1e-09 65.9 101 33.7
THA.LOC104799764 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 9.1e-09 65.9 101 36.6
Sp7g10190 Schrenkiella parvula HOM05D023724 ORTHO05D018798 1.2e-08 65.5 91 39.6
BraA09t39146Z Brassica rapa HOM05D024794 ORTHO05D021696 2.0e-08 64.7 101 34.7
BcaB04g17628 Brassica carinata HOM05D000003 ORTHO05D000006 2.6e-08 64.3 117 33.3
THA.LOC104807150 Tarenaya hassleriana HOM05D000583 ORTHO05D000004 3.4e-08 63.9 101 35.6
Carub.0001s3395 Capsella rubella HOM05D000003 ORTHO05D000006 5.9e-08 63.2 103 33.0
THA.LOC104801863 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.9e-08 63.2 108 32.4
THA.LOC104807977 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 5.9e-08 63.2 101 32.7
THA.LOC104825355 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 7.7e-08 62.8 120 32.5
AL4G12860 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.0e-07 62.4 120 32.5
A04p02300 Brassica napus HOM05D000003 ORTHO05D000283 1.0e-07 62.4 100 32.0
BraA03t14905Z Brassica rapa HOM05D000003 ORTHO05D000006 1.0e-07 62.4 101 32.7
BcaC07g40680 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-07 62.0 174 29.3
ECA240G3680 Erigeron canadensis HOM05D000006 ORTHO05D011515 1.7e-07 61.6 102 37.3
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.7e-07 61.6 203 25.1
BcaNung00490 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-07 61.2 99 31.3
BolC8t49563H Brassica oleracea HOM05D000003 ORTHO05D000004 2.9e-07 60.8 155 27.7
ECA232G4882 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-07 60.5 103 37.9
ECA233G5953 Erigeron canadensis HOM05D000006 ORTHO05D000004 3.8e-07 60.5 102 38.2
ECA240G4606 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-07 60.5 126 33.3
BcaB01g01880 Brassica carinata HOM05D000003 ORTHO05D000006 5.0e-07 60.1 121 28.9
ECA246G0649 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.0e-07 60.1 102 40.2
ECA233G1352 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.5e-07 59.7 139 30.2
AL3G46190 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 8.5e-07 59.3 63 44.4
BolC4t25041H Brassica oleracea HOM05D000003 ORTHO05D000006 8.5e-07 59.3 100 31.0
Dinv22914 Davidia involucrata HOM05D000003 ORTHO05D000006 8.5e-07 59.3 111 32.4
THA.LOC104809801 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 8.5e-07 59.3 99 29.3
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.1e-06 58.9 101 30.7
Dinv03908 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-06 58.9 108 36.1
BcaC01g05052 Brassica carinata HOM05D000003 ORTHO05D000006 1.4e-06 58.5 100 31.0
Aa31LG9G10580 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.9e-06 58.2 151 28.5
CANSAT35G1518 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 58.2 160 28.1
ECA238G4169 Erigeron canadensis HOM05D000014 ORTHO05D000004 1.9e-06 58.2 102 36.3
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.9e-06 58.2 120 30.0
Aa31sc465G50 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.5e-06 57.8 100 34.0
BcaB07g33355 Brassica carinata HOM05D003728 ORTHO05D000006 2.5e-06 57.8 99 33.3
BcaC01g02276 Brassica carinata HOM05D000003 ORTHO05D000006 2.5e-06 57.8 82 36.6
CAN.G12.24 Capsicum annuum HOM05D000003 ORTHO05D000006 2.5e-06 57.8 99 31.3
Dinv26733 Davidia involucrata HOM05D000003 ORTHO05D000006 2.5e-06 57.8 99 34.3
Dinv36398 Davidia involucrata HOM05D000003 ORTHO05D000006 2.5e-06 57.8 107 29.9
BcaC07g39441 Brassica carinata HOM05D000003 ORTHO05D000006 4.2e-06 57.0 210 22.9
Dinv19970 Davidia involucrata HOM05D000003 ORTHO05D000007 4.2e-06 57.0 102 34.3
ECA246G0257 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.2e-06 57.0 107 34.6
Potri.015G051101 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.2e-06 57.0 106 34.0
Sabra16G0124300 Salix brachista HOM05D000003 ORTHO05D000006 4.2e-06 57.0 115 29.6
TPR.G520 Trifolium pratense HOM05D041061 ORTHO05D020833 4.2e-06 57.0 113 31.9
Aa31LG9G2500 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-06 56.6 134 30.6
AT1G43760 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 5.5e-06 56.6 102 28.4
BcaC02g11663 Brassica carinata HOM05D003728 ORTHO05D000006 5.5e-06 56.6 98 30.6
BolC3t18992H Brassica oleracea HOM05D000003 ORTHO05D000006 5.5e-06 56.6 82 35.4
BolC9t58580H Brassica oleracea HOM05D000003 ORTHO05D000006 5.5e-06 56.6 100 31.0
Dinv13387 Davidia involucrata HOM05D015672 ORTHO05D000006 5.5e-06 56.6 102 30.4
ECA232G2129 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 56.6 102 35.3
ECA233G4990 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 56.6 102 37.3
ECA236G4138 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 56.6 105 34.3
ECA240G2873 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.5e-06 56.6 102 35.3
ECA246G3015 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 56.6 157 29.3
ECA247G0384 Erigeron canadensis HOM05D000006 ORTHO05D000004 5.5e-06 56.6 108 35.2
ECA247G2259 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.5e-06 56.6 107 35.5
Potri.012G064001 Populus trichocarpa HOM05D000003 ORTHO05D000006 5.5e-06 56.6 106 34.0
BolC5t33175H Brassica oleracea HOM05D003728 ORTHO05D000006 7.2e-06 56.2 100 30.0
BolC6t36722H Brassica oleracea HOM05D000003 ORTHO05D000006 7.2e-06 56.2 162 24.7
Dinv11312 Davidia involucrata HOM05D000097 ORTHO05D000041 7.2e-06 56.2 109 33.0
ECA240G1800 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.2e-06 56.2 103 37.9
Potri.003G047051 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.2e-06 56.2 101 34.7
Potri.017G066550 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.2e-06 56.2 101 34.7
Sp4g06970 Schrenkiella parvula HOM05D000003 ORTHO05D000004 7.2e-06 56.2 73 39.7
Aa31sc224G10 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.4e-06 55.8 103 29.1
BcaB07g33431 Brassica carinata HOM05D000003 ORTHO05D000006 9.4e-06 55.8 100 29.0
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 9.4e-06 55.8 101 31.7
A01p09390 Brassica napus HOM05D000096 ORTHO05D000045 9.4e-06 55.8 48 52.1
ECA236G2177 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.4e-06 55.8 152 29.6
ECA240G1472 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.4e-06 55.8 207 28.0
Potri.004G128840 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128860 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128880 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128901 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128921 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128941 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Potri.004G128961 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.4e-06 55.8 106 34.0
Sabra02G0111100 Salix brachista HOM05D000003 ORTHO05D000006 9.4e-06 55.8 202 28.2


User provided reference genes

Program Settings