Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g24970 Schrenkiella parvula HOM05D017066 ORTHO05D023126 1.5e-100 369.4 175 100.0
SpUn0088_0030 Schrenkiella parvula HOM05D017066 ORTHO05D023126 1.1e-53 213.8 163 66.3
SpUn0054_0070 Schrenkiella parvula HOM05D017066 ORTHO05D023126 2.8e-41 172.6 151 60.9
Sp4g08800 Schrenkiella parvula HOM05D017066 ORTHO05D023126 7.8e-20 101.3 78 62.8
Sp7g11280 Schrenkiella parvula HOM05D017066 ORTHO05D005672 1.7e-19 100.1 163 41.7
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-09 67.4 65 43.1
Carub.0004s0674 Capsella rubella HOM05D025401 ORTHO05D026774 8.1e-09 64.7 108 33.3
Sp5g19820 Schrenkiella parvula HOM05D006837 ORTHO05D009407 1.1e-08 64.3 43 69.8
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 4.0e-08 62.4 63 44.4
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-07 60.8 78 33.3
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 1.5e-07 60.5 65 41.5
Sp4g06650 Schrenkiella parvula HOM05D017066 ORTHO05D023126 2.0e-07 60.1 42 64.3
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-07 59.3 76 36.8
BolC9t55626H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-07 59.3 76 36.8
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 4.4e-07 58.9 65 43.1
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-07 58.5 76 36.8
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 5.8e-07 58.5 66 43.9
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 5.8e-07 58.5 59 44.1
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-07 58.2 63 41.3
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-07 58.2 63 41.3
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 9.9e-07 57.8 76 36.8
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 9.9e-07 57.8 59 44.1
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-06 57.4 63 41.3
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 57.0 63 41.3
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-06 57.0 76 36.8
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-06 56.6 91 34.1
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-06 56.2 63 41.3
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-06 56.2 63 41.3
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 2.9e-06 56.2 63 41.3
CARHR284490 Cardamine hirsuta HOM05D000589 ORTHO05D001885 2.9e-06 56.2 71 40.8
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.8 63 42.9
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.8 63 41.3
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-06 55.8 63 41.3
BolC4t24673H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-06 55.5 63 39.7
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-06 55.5 63 41.3
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 4.9e-06 55.5 78 33.3
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 4.9e-06 55.5 62 40.3
Sp4g09410 Schrenkiella parvula HOM05D017066 ORTHO05D023126 4.9e-06 55.5 36 72.2
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-06 55.1 76 35.5
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-06 55.1 63 39.7
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 8.4e-06 54.7 63 39.7
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 8.4e-06 54.7 54 40.7
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 8.4e-06 54.7 78 32.1
CARHR059960 Cardamine hirsuta HOM05D000589 ORTHO05D001885 8.4e-06 54.7 55 47.3


User provided reference genes

Program Settings