Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g24730 Schrenkiella parvula HOM05D000034 ORTHO05D000037 3.9e-116 421.4 203 100.0
AL5G20880 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 7.9e-48 194.5 259 44.4
Sp4g09120 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.6e-32 143.7 196 43.4
BolC2t08059H Brassica oleracea HOM05D000034 ORTHO05D000037 3.0e-31 139.4 260 36.2
BolC5t32760H Brassica oleracea HOM05D000034 ORTHO05D000037 3.0e-31 139.4 260 35.4
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 1.9e-30 136.7 255 35.3
Sp3g29190 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.5e-27 127.1 192 42.2
AT1G43722 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 2.6e-27 126.3 227 37.4
C02p00030 Brassica napus HOM05D000034 ORTHO05D000037 4.5e-27 125.6 227 37.0
BraA10t43212Z Brassica rapa HOM05D000034 ORTHO05D000037 4.5e-27 125.6 227 37.0
C02p19270 Brassica napus HOM05D000034 ORTHO05D000037 1.9e-25 120.2 227 36.6
BcaC01g00381 Brassica carinata HOM05D000034 ORTHO05D000037 7.2e-25 118.2 227 36.1
C05p40170 Brassica napus HOM05D000034 ORTHO05D000037 7.2e-25 118.2 260 33.1
C03p81310 Brassica napus HOM05D000034 ORTHO05D000037 4.6e-24 115.5 224 35.7
BolC3t20396H Brassica oleracea HOM05D000034 ORTHO05D000037 7.9e-24 114.8 224 35.7
C05p15550 Brassica napus HOM05D000034 ORTHO05D000037 1.8e-23 113.6 227 35.7
C07p15910 Brassica napus HOM05D000034 ORTHO05D000037 2.3e-23 113.2 227 35.2
BolC3t20705H Brassica oleracea HOM05D000034 ORTHO05D000037 2.5e-22 109.8 84 61.9
Sp2g07600 Schrenkiella parvula HOM05D000034 ORTHO05D000037 3.3e-22 109.4 161 42.9
BolC1t02225H Brassica oleracea HOM05D000034 ORTHO05D000037 1.6e-21 107.1 232 32.3
BolC2t12232H Brassica oleracea HOM05D000034 ORTHO05D000037 2.8e-21 106.3 84 60.7
BolC7t42084H Brassica oleracea HOM05D000034 ORTHO05D000037 2.8e-21 106.3 84 60.7
BraA04t16762Z Brassica rapa HOM05D000034 ORTHO05D000037 3.7e-21 105.9 84 60.7
AT3G30525 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 6.3e-21 105.1 92 55.4
BraA06t25865Z Brassica rapa HOM05D000034 ORTHO05D000037 1.1e-20 104.4 83 60.2
BolC8t50526H Brassica oleracea HOM05D000034 ORTHO05D000037 6.9e-20 101.7 84 56.0
A09p29760 Brassica napus HOM05D000034 ORTHO05D000037 2.0e-19 100.1 83 57.8
BolC4t22216H Brassica oleracea HOM05D000034 ORTHO05D000037 5.0e-18 95.5 84 52.4
BolC4t25348H Brassica oleracea HOM05D000034 ORTHO05D000037 6.5e-18 95.1 84 52.4
A09p34710 Brassica napus HOM05D004101 ORTHO05D005221 4.6e-16 89.0 260 24.6
BraSC36t46074Z Brassica rapa HOM05D000034 ORTHO05D000037 3.9e-15 85.9 52 73.1
A06p20510 Brassica napus HOM05D000034 ORTHO05D000037 1.5e-14 84.0 51 74.5
BolC4t24236H Brassica oleracea HOM05D000034 ORTHO05D000037 2.2e-10 70.1 109 41.3
arahy.Tifrunner.gnm1.ann1.6D5SIE Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-10 69.7 98 34.7
C03p63410 Brassica napus HOM05D000034 ORTHO05D000037 6.5e-10 68.6 109 40.4
A03p38980 Brassica napus HOM05D000034 ORTHO05D000037 3.2e-09 66.2 45 68.9
BraA06t25714Z Brassica rapa HOM05D000034 ORTHO05D000037 3.2e-09 66.2 45 71.1
CSS0016021 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.2e-09 65.1 81 39.5
ECA233G0273 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-08 64.3 83 42.2
BolC3t17229H Brassica oleracea HOM05D000034 ORTHO05D000037 1.6e-08 63.9 108 36.1
Hund04398 Selenicereus undatus HOM05D000034 ORTHO05D000037 1.6e-08 63.9 83 42.2
arahy.Tifrunner.gnm1.ann1.WA83K8 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-08 63.5 134 29.9
C05p34990 Brassica napus HOM05D000034 ORTHO05D000037 4.7e-08 62.4 98 35.7
A01p37390 Brassica napus HOM05D000034 ORTHO05D000037 6.1e-08 62.0 86 39.5
AUR62036686 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.1e-08 62.0 119 31.9
TPR.G31033 Trifolium pratense HOM05D000034 ORTHO05D000037 6.1e-08 62.0 83 39.8
Psat7g113720 Pisum sativum HOM05D011477 ORTHO05D000037 7.9e-08 61.6 86 34.9
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.9e-08 61.6 83 39.8
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-07 61.2 83 39.8
arahy.Tifrunner.gnm1.ann1.UAQH0I Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 60.8 108 32.4
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-07 60.8 81 35.8
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-07 60.5 108 32.4
arahy.Tifrunner.gnm1.ann1.FU056K Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-07 60.5 111 33.3
arahy.Tifrunner.gnm1.ann1.JL1WEN Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-07 60.5 108 32.4
Hma1.2p1_0148F.1_g066085 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-07 60.5 108 31.5
arahy.Tifrunner.gnm1.ann1.JE1DTX Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-07 60.1 109 31.2
FvH4_2g13361 Fragaria vesca HOM05D000034 ORTHO05D000037 2.3e-07 60.1 83 37.3
QL08p042355 Quercus lobata HOM05D000034 ORTHO05D000037 3.0e-07 59.7 155 26.5
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 5.1e-07 58.9 78 41.0
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 5.1e-07 58.9 78 41.0
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 5.1e-07 58.9 78 41.0
TPR.G34480 Trifolium pratense HOM05D000034 ORTHO05D000037 5.1e-07 58.9 84 36.9
Zm00001eb050270 Zea mays HOM05D000034 ORTHO05D000037 5.1e-07 58.9 80 37.5
arahy.Tifrunner.gnm1.ann1.TEB0R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.7e-07 58.5 108 32.4
AUR62020230 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.7e-07 58.5 108 31.5
Hma1.2p1_0148F.1_g066090 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-07 58.5 83 34.9
Hma1.2p1_0512F.1_g169340 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-07 58.5 79 35.4
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 8.8e-07 58.2 83 38.6
ECA234G4025 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.8e-07 58.2 83 38.6
RcHm_v2.0_Chr6g0292381 Rosa chinensis HOM05D000034 ORTHO05D000037 8.8e-07 58.2 83 38.6
TWI56G1270 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.8e-07 58.2 83 39.8
C02p35730 Brassica napus HOM05D000034 ORTHO05D000037 1.1e-06 57.8 135 28.9
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-06 57.8 85 36.5
AUR62020810 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-06 57.8 85 36.5
Hma1.2p1_0344F.1_g131060 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-06 57.8 111 30.6
TWI56G1116 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-06 57.8 85 36.5
arahy.Tifrunner.gnm1.ann1.HJV46F Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-06 57.4 145 26.9
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-06 57.4 120 31.7
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 1.5e-06 57.4 83 36.1
HanXRQChr13g0400341 Helianthus annuus HOM05D000034 ORTHO05D000037 1.5e-06 57.4 83 38.6
LjContig00357g0008414 Lotus japonicus HOM05D000034 ORTHO05D000037 1.5e-06 57.4 93 36.6
arahy.Tifrunner.gnm1.ann1.WG15T1 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-06 57.0 87 32.2
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-06 57.0 108 31.5
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.0e-06 57.0 114 32.5
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 2.0e-06 57.0 113 33.6
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 2.0e-06 57.0 83 36.1
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 2.6e-06 56.6 83 33.7
arahy.Tifrunner.gnm1.ann1.J2XTQL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-06 56.6 83 38.6
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-06 56.6 113 32.7
CSS0049565 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-06 56.6 81 38.3
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-06 56.6 113 32.7
Os11g0202600 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 2.6e-06 56.6 79 36.7
Rhsim12G0127400 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.6e-06 56.6 152 26.3
arahy.Tifrunner.gnm1.ann1.Y4Z60F Arachis hypogaea HOM05D000034 ORTHO05D000037 3.3e-06 56.2 108 31.5
EL10Ac7g16586 Beta vulgaris HOM05D000034 ORTHO05D000037 3.3e-06 56.2 83 36.1
BcaB05g23950 Brassica carinata HOM05D000034 ORTHO05D000037 3.3e-06 56.2 81 38.3
THA.LOC109117196 Tarenaya hassleriana HOM05D000034 ORTHO05D000037 3.3e-06 56.2 84 34.5
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-06 55.8 119 31.1
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 4.4e-06 55.8 83 36.1
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 4.4e-06 55.8 83 36.1
Hma1.2p1_0148F.1_g065930 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 4.4e-06 55.8 168 27.4
Lj6g0017025 Lotus japonicus HOM05D000034 ORTHO05D000037 4.4e-06 55.8 93 35.5
Rhsim09G0086200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.4e-06 55.8 93 31.2
TWI31G0756 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-06 55.8 97 34.0
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 5.7e-06 55.5 83 36.1
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.7e-06 55.5 83 37.3
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 5.7e-06 55.5 83 37.3
AUR62013970 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.7e-06 55.5 85 36.5
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.7e-06 55.5 116 30.2
arahy.Tifrunner.gnm1.ann1.D4V5SR Arachis hypogaea HOM05D000034 ORTHO05D000037 7.4e-06 55.1 83 36.1
EL10Ac4g09223 Beta vulgaris HOM05D000034 ORTHO05D000037 7.4e-06 55.1 89 37.1
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0011045 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 87 34.5
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 99 34.3
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-06 55.1 90 36.7
BcaC01g01276 Brassica carinata HOM05D000034 ORTHO05D000037 9.7e-06 54.7 81 39.5
BcaC08g43145 Brassica carinata HOM05D000034 ORTHO05D000037 9.7e-06 54.7 81 38.3
QL10p013157 Quercus lobata HOM05D000034 ORTHO05D000037 9.7e-06 54.7 83 34.9
TWI31G1184 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-06 54.7 83 34.9
TWI32G1210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-06 54.7 83 34.9
TWI53G0204 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-06 54.7 83 34.9
TWI75G0521 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-06 54.7 83 34.9


User provided reference genes

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