Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 4.1e-75 284.6 144 100.0
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.3e-65 253.1 154 85.7
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 2.9e-65 251.9 150 86.0
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 2.9e-65 251.9 150 86.0
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 1.9e-64 249.2 150 85.3
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 2.5e-64 248.8 150 86.0
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 2.5e-64 248.8 150 86.0
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 7.2e-64 247.3 154 83.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 9.5e-64 246.9 152 83.6
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.2e-63 246.5 153 82.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.6e-63 246.1 154 83.1
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 4.7e-63 244.6 150 83.3
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.8e-62 242.7 154 80.5
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 6.8e-62 240.7 150 82.7
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 2.3e-57 225.7 143 76.9
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.4e-53 211.5 119 85.7
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.1e-47 192.6 127 74.0
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.1e-47 192.6 127 74.0
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.8e-46 189.5 137 69.3
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 2.3e-46 189.1 115 78.3
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 5.2e-46 188.0 134 68.7
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 5.2e-46 188.0 137 69.3
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 6.8e-46 187.6 127 73.2
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.2e-45 186.8 118 74.6
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 1.5e-45 186.4 127 68.5
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.0e-45 186.0 123 72.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 9.8e-45 183.7 116 74.1
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 1.3e-44 183.3 121 71.1
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 2.2e-44 182.6 115 74.8
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.9e-44 182.2 112 76.8
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 6.4e-44 181.0 128 68.0
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.1e-43 180.3 118 71.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.4e-43 179.9 128 70.3
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.4e-43 179.9 128 70.3
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 1.4e-43 179.9 138 61.6
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 1.4e-43 179.9 138 61.6
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.9e-43 179.5 113 76.1
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 2.4e-43 179.1 116 70.7
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 2.4e-43 179.1 125 71.2
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.4e-43 179.1 138 60.1
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 5.4e-43 177.9 119 72.3
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 7.0e-43 177.6 117 73.5
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 7.0e-43 177.6 120 70.8
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 1.2e-42 176.8 112 73.2
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.2e-42 176.8 114 73.7
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 1.6e-42 176.4 113 72.6
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 2.7e-42 175.6 117 75.2
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 3.5e-42 175.3 140 60.7
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 4.6e-42 174.9 120 69.2
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 4.6e-42 174.9 113 71.7
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.3e-41 173.3 140 62.9
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.7e-41 172.9 119 73.1
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 2.3e-41 172.6 135 62.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 3.0e-41 172.2 118 66.1
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 3.0e-41 172.2 120 67.5
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 3.0e-41 172.2 141 61.7
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 3.9e-41 171.8 117 70.1
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 5.0e-41 171.4 141 61.7
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 5.0e-41 171.4 141 61.7
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 6.6e-41 171.0 113 75.2
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 6.6e-41 171.0 113 75.2
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 6.6e-41 171.0 125 69.6
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 8.6e-41 170.6 112 71.4
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.5e-40 169.9 128 64.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.5e-40 169.9 112 72.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.5e-40 169.9 114 70.2
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 1.9e-40 169.5 112 67.9
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 3.3e-40 168.7 132 61.4
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.3e-40 168.7 114 67.5
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 4.3e-40 168.3 116 71.6
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.3e-40 168.3 115 67.0
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 7.3e-40 167.5 114 69.3
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 1.6e-39 166.4 114 69.3
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 2.8e-39 165.6 159 54.1
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 2.8e-39 165.6 187 49.2
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 4.7e-39 164.9 136 58.8
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.7e-39 164.9 119 66.4
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 6.2e-39 164.5 115 66.1
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 8.1e-39 164.1 128 62.5
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.3e-38 162.5 118 66.1
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 2.3e-38 162.5 141 58.9
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 4.0e-38 161.8 116 64.7
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.2e-38 161.4 138 63.0
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.2e-37 160.2 119 65.5
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 6.4e-36 154.5 134 59.0
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 7.1e-35 151.0 116 65.5
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 6.6e-33 144.4 112 63.4
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 4.3e-32 141.7 98 67.3
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 5.6e-32 141.4 101 67.3
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 5.6e-32 141.4 110 60.9
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.4e-30 136.7 116 60.3
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 6.8e-30 134.4 116 59.5
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 6.8e-30 134.4 102 65.7
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.3e-28 130.2 118 58.5
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.7e-28 129.8 117 56.4
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.2e-27 125.6 122 57.4
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 4.1e-27 125.2 119 52.9
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 4.1e-27 125.2 114 53.5
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 1.6e-26 123.2 74 78.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 2.1e-26 122.9 87 66.7
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.0e-25 120.6 117 47.0
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.6e-25 117.9 98 58.2
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.9e-24 116.3 136 45.6
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.6e-23 113.2 115 48.7
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 3.6e-23 112.1 76 69.7
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 9.0e-22 107.5 68 75.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 3.2e-19 99.0 63 74.6
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.9e-16 89.7 53 77.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.9e-16 89.7 65 64.6
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 5.6e-16 88.2 48 89.6
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 4.0e-14 82.0 52 65.4
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 6.9e-14 81.3 53 71.7
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.4e-11 71.6 93 47.3
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 6.0e-10 68.2 79 53.2
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 7.9e-10 67.8 102 35.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 1.0e-09 67.4 61 47.5
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 3.1e-06 55.8 59 57.6


User provided reference genes

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