Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 7.0e-89 330.9 202 100.0
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.0e-79 300.4 203 91.1
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 6.8e-76 287.7 203 78.8
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 6.8e-76 287.7 203 78.8
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 5.7e-75 284.6 203 78.8
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 5.7e-75 284.6 203 78.8
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 9.8e-75 283.9 203 77.8
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 8.3e-74 280.8 202 74.3
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.3e-71 273.5 202 73.8
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.5e-70 270.0 202 73.3
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 8.9e-68 260.8 203 81.3
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.5e-59 233.4 200 65.5
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 7.8e-56 221.1 204 75.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 2.4e-44 183.0 118 78.0
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 4.0e-44 182.2 118 78.8
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.8e-44 181.4 204 52.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 2.0e-43 179.9 113 77.0
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.0e-43 179.9 118 76.3
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.0e-43 179.9 118 76.3
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.6e-43 179.5 118 75.4
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 2.6e-43 179.5 113 77.0
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 5.8e-43 178.3 118 72.0
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 7.6e-43 177.9 112 73.2
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 7.6e-43 177.9 186 62.9
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 7.6e-43 177.9 116 74.1
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.7e-42 176.8 199 56.8
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.7e-42 176.8 118 72.9
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 2.2e-42 176.4 115 73.9
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 3.8e-42 175.6 115 73.9
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.9e-42 175.3 114 74.6
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 4.9e-42 175.3 214 58.4
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 6.4e-42 174.9 112 75.0
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 8.4e-42 174.5 118 72.0
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.4e-41 173.7 113 74.3
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.9e-41 173.3 184 65.8
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.9e-41 173.3 112 72.3
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.9e-41 173.3 118 73.7
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 2.4e-41 172.9 118 70.3
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 2.4e-41 172.9 115 75.7
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 3.2e-41 172.6 119 74.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 4.2e-41 172.2 118 74.6
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.2e-41 172.2 210 57.6
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 7.1e-41 171.4 110 78.2
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 9.3e-41 171.0 118 73.7
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 9.3e-41 171.0 211 58.3
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 9.3e-41 171.0 110 76.4
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.2e-40 170.6 109 75.2
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.6e-40 170.2 118 71.2
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 2.1e-40 169.9 211 57.8
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.7e-40 169.5 108 75.0
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.5e-40 169.1 118 72.9
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.6e-40 168.7 114 73.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 4.6e-40 168.7 193 58.0
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 4.6e-40 168.7 201 53.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 7.8e-40 167.9 112 75.9
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 7.8e-40 167.9 111 72.1
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.0e-39 167.5 112 74.1
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 1.3e-39 167.2 115 70.4
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.3e-39 167.2 201 53.2
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.7e-39 166.8 119 70.6
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.7e-39 166.8 119 70.6
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.7e-39 166.8 119 70.6
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.0e-39 166.0 119 70.6
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 3.9e-39 165.6 106 76.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 5.1e-39 165.2 107 73.8
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 5.1e-39 165.2 112 72.3
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.7e-39 164.5 119 70.6
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 8.7e-39 164.5 118 71.2
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 8.7e-39 164.5 108 75.0
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.1e-38 164.1 180 55.6
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.1e-38 164.1 115 70.4
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.5e-38 163.7 112 71.4
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.5e-38 163.7 110 72.7
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.5e-38 163.7 173 52.6
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.9e-38 163.3 115 70.4
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 1.9e-38 163.3 118 69.5
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.9e-38 163.3 186 54.3
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 2.5e-38 162.9 108 73.1
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.5e-38 162.9 107 72.0
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 3.3e-38 162.5 112 69.6
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 3.3e-38 162.5 219 55.3
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 5.6e-38 161.8 119 68.9
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 7.3e-38 161.4 112 71.4
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.3e-37 160.6 115 68.7
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 2.1e-37 159.8 118 66.1
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.1e-37 159.8 113 70.8
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 2.1e-37 159.8 112 68.8
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 2.8e-37 159.5 118 66.9
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 8.1e-37 157.9 109 70.6
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.1e-36 157.5 112 72.3
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-36 156.8 115 69.6
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.8e-36 156.8 187 55.6
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.8e-36 156.8 107 70.1
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 4.0e-36 155.6 118 66.9
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 4.0e-36 155.6 112 67.0
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 2.0e-35 153.3 108 67.6
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.6e-35 152.9 116 58.6
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.6e-35 151.4 101 74.3
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 1.3e-34 150.6 112 59.8
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.2e-33 146.0 106 58.5
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.2e-33 146.0 110 68.2
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.1e-30 137.5 88 75.0
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.1e-30 137.5 113 63.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 7.3e-30 134.8 151 51.7
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.1e-29 133.3 79 81.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 6.9e-28 128.3 119 59.7
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.2e-27 127.5 113 52.2
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.1e-25 120.9 115 57.4
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 2.4e-25 119.8 109 53.2
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 7.1e-25 118.2 101 51.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 3.5e-24 115.9 116 50.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 3.2e-17 92.8 149 44.3
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.1e-16 90.1 163 52.1
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 3.0e-15 86.3 72 58.3
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 1.9e-09 67.0 151 57.6


User provided reference genes

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