Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 2.5e-124 448.7 217 100.0
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 5.2e-114 414.5 215 91.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 3.3e-113 411.8 214 91.6
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 9.7e-113 410.2 217 90.3
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.1e-111 406.8 217 88.9
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 3.8e-109 398.3 217 88.0
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 8.5e-109 397.1 214 88.8
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-108 396.7 217 88.0
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-108 396.7 217 88.0
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.1e-108 396.7 217 88.0
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 4.2e-108 394.8 214 88.8
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.7e-107 392.1 217 86.6
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 7.7e-102 374.0 217 82.5
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 3.0e-98 362.1 217 82.5
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.9e-79 299.7 216 63.9
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.4e-79 299.3 214 63.1
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 9.2e-79 297.4 214 64.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 9.2e-79 297.4 215 64.2
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.2e-78 297.0 214 64.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 7.8e-78 294.3 214 63.1
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.0e-77 293.9 214 61.7
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.7e-77 293.1 174 78.2
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 3.0e-77 292.4 214 62.1
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.9e-77 292.0 214 61.2
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 6.6e-77 291.2 214 60.7
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 8.6e-77 290.8 212 62.7
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.1e-76 290.4 215 61.4
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.1e-76 290.4 214 61.2
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.5e-76 290.0 216 62.5
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.9e-76 289.7 213 61.5
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 4.3e-76 288.5 216 62.0
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 4.3e-76 288.5 213 63.4
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 4.3e-76 288.5 214 62.6
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 7.3e-76 287.7 211 62.1
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 7.3e-76 287.7 214 60.7
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 9.5e-76 287.3 214 59.8
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.2e-75 287.0 212 62.7
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.8e-75 285.8 210 59.5
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 4.7e-75 285.0 214 60.7
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.1e-74 283.9 210 59.5
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.1e-74 283.9 214 60.3
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.8e-74 283.1 214 59.8
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.3e-74 282.7 213 60.6
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 2.3e-74 282.7 212 60.4
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 2.3e-74 282.7 214 59.8
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 4.0e-74 282.0 216 61.6
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 4.0e-74 282.0 215 59.5
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 5.2e-74 281.6 189 77.2
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.5e-73 280.0 211 60.2
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.5e-73 280.0 212 60.4
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 2.0e-73 279.6 215 58.6
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 3.4e-73 278.9 214 58.9
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.8e-73 278.1 213 59.2
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 7.5e-73 277.7 225 59.6
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 9.8e-73 277.3 214 59.3
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 9.8e-73 277.3 229 59.4
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.3e-72 276.9 211 59.7
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 2.2e-72 276.2 212 59.4
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.2e-72 276.2 213 58.7
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 2.9e-72 275.8 224 59.8
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 3.7e-72 275.4 216 58.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 3.7e-72 275.4 211 59.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 3.7e-72 275.4 211 57.8
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 4.9e-72 275.0 212 58.0
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 4.9e-72 275.0 214 58.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 6.4e-72 274.6 213 57.3
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.1e-71 273.9 213 59.2
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.9e-71 273.1 203 62.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 2.4e-71 272.7 212 58.5
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 4.1e-71 271.9 210 58.6
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 7.1e-71 271.2 215 56.7
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.2e-70 270.4 212 59.4
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.6e-70 270.0 213 57.7
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.1e-70 269.6 179 68.2
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.7e-70 269.2 212 57.1
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 2.7e-70 269.2 212 58.0
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 3.5e-70 268.9 215 59.1
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.5e-70 268.9 215 56.3
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 1.7e-69 266.5 212 57.5
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.9e-69 265.4 213 55.9
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 6.6e-69 264.6 212 57.1
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 4.3e-68 261.9 212 56.1
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 5.6e-68 261.5 208 53.8
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 9.5e-68 260.8 211 56.9
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.6e-67 260.0 211 55.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.6e-67 260.0 215 54.9
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 3.6e-67 258.8 211 56.4
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 3.6e-67 258.8 268 46.3
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 4.7e-67 258.5 210 55.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 3.1e-66 255.8 208 56.7
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.2e-65 253.8 209 56.0
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 2.6e-65 252.7 208 53.4
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 3.4e-65 252.3 209 55.5
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.4e-63 246.1 211 54.0
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 2.8e-59 232.6 174 60.3
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.1e-58 230.7 210 50.0
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 5.2e-58 228.4 213 49.8
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 5.2e-58 228.4 244 46.7
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.4e-57 225.7 174 59.8
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.7e-56 223.4 205 53.2
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.4e-55 219.5 174 59.2
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 7.1e-55 218.0 175 57.7
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.2e-54 217.2 215 47.4
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.7e-53 213.4 216 46.8
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 9.6e-52 207.6 216 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 6.9e-50 201.4 208 47.1
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.3e-48 197.2 153 60.1
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 5.4e-47 191.8 209 40.2
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 9.3e-47 191.0 204 45.1
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 2.7e-46 189.5 157 56.7
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.7e-46 189.5 214 43.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 3.5e-46 189.1 213 41.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 3.3e-44 182.6 208 40.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 6.9e-42 174.9 159 50.3
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 2.1e-38 163.3 136 54.4
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.4e-36 154.8 164 46.3
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.2e-33 147.5 112 59.8
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 8.7e-29 131.3 217 31.8
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-27 127.5 82 68.3
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 3.4e-25 119.4 158 47.5
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.9e-24 116.3 112 50.9
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.4e-18 96.7 94 47.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.8e-16 89.4 221 26.7
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 8.8e-13 78.2 102 35.3
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 9.7e-12 74.7 97 41.2
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 2.2e-11 73.6 50 66.0
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 3.1e-10 69.7 43 67.4


User provided reference genes

Program Settings