Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 4.1e-65 251.1 117 100.0
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 3.9e-23 111.7 79 70.9
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 2.5e-22 109.0 79 68.4
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 6.2e-21 104.4 79 65.8
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 67.1
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 67.1
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 65.8
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 67.1
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 65.8
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 67.1
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 67.1
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 8.0e-21 104.0 79 65.8
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 2.3e-20 102.4 79 64.6
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 5.2e-20 101.3 79 63.3
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 6.8e-20 100.9 79 64.6
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 3.4e-19 98.6 79 63.3
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 1.3e-18 96.7 82 58.5
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 9.2e-17 90.5 79 59.5
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 2.5e-14 82.4 77 55.8
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 4.1e-09 65.1 79 41.8
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 2.3e-07 59.3 87 39.1
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 2.3e-07 59.3 87 39.1
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 3.0e-07 58.9 98 37.8
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 5.1e-07 58.2 88 39.8
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 5.1e-07 58.2 90 37.8
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 8.6e-07 57.4 87 37.9
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 1.1e-06 57.0 87 37.9
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-06 57.0 87 36.8
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.5e-06 56.6 87 37.9
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 1.5e-06 56.6 87 37.9
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 1.9e-06 56.2 87 37.9
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 4.3e-06 55.1 87 36.8
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 4.3e-06 55.1 87 36.8
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 4.3e-06 55.1 87 36.8
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 4.3e-06 55.1 87 36.8
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 4.3e-06 55.1 99 37.4
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 4.3e-06 55.1 87 36.8
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 9.5e-06 53.9 87 35.6
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 9.5e-06 53.9 87 36.8


User provided reference genes

Program Settings