Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 8.1e-144 513.8 282 100.0
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 2.5e-116 422.5 282 86.2
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 5.7e-113 411.4 287 84.3
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 6.3e-112 407.9 287 84.3
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 6.3e-112 407.9 287 84.3
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 6.3e-112 407.9 287 84.3
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 8.2e-112 407.5 287 83.6
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 5.1e-106 388.3 282 78.4
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 4.1e-103 378.6 277 78.3
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 6.5e-101 371.3 283 78.1
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.9e-92 343.2 285 72.3
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 1.8e-82 310.1 275 66.2
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 6.0e-62 241.9 289 52.9
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 6.0e-62 241.9 265 58.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 3.0e-61 239.6 253 59.3
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 5.0e-61 238.8 266 56.8
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 6.6e-61 238.4 247 58.7
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 1.1e-60 237.7 243 61.3
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 1.1e-60 237.7 293 54.6
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 5.6e-60 235.3 258 57.8
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 9.5e-60 234.6 294 52.4
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 9.5e-60 234.6 269 54.6
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 1.2e-59 234.2 291 52.2
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.2e-59 234.2 269 54.6
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 1.2e-59 234.2 252 58.7
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.6e-59 233.8 269 54.6
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 2.1e-59 233.4 295 52.9
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 6.2e-59 231.9 262 53.8
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 8.1e-59 231.5 217 64.1
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.8e-58 230.3 281 54.1
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 2.3e-58 229.9 273 57.9
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 3.1e-58 229.6 260 56.5
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 4.0e-58 229.2 299 51.5
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 4.0e-58 229.2 241 56.0
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 6.8e-58 228.4 232 57.8
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.2e-57 227.6 260 57.3
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.5e-57 227.3 217 61.3
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.5e-57 227.3 214 61.7
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 1.5e-57 227.3 248 56.5
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 2.0e-57 226.9 261 53.3
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 2.0e-57 226.9 232 56.9
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 2.0e-57 226.9 278 55.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 2.6e-57 226.5 263 53.6
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 2.6e-57 226.5 287 51.2
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 3.4e-57 226.1 235 57.0
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 4.4e-57 225.7 225 58.2
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.4e-57 225.7 265 54.3
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 4.4e-57 225.7 212 60.8
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 5.8e-57 225.3 289 50.2
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 9.8e-57 224.6 211 62.6
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 9.8e-57 224.6 260 54.6
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.3e-56 224.2 211 61.1
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 1.7e-56 223.8 254 53.9
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 2.2e-56 223.4 295 50.5
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 6.4e-56 221.9 240 57.9
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 6.4e-56 221.9 265 53.6
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 8.3e-56 221.5 273 52.4
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 8.3e-56 221.5 254 53.5
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 2.4e-55 219.9 248 52.4
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 2.4e-55 219.9 214 63.1
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 4.1e-55 219.2 252 53.6
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 7.1e-55 218.4 266 53.4
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 1.6e-54 217.2 256 54.3
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 3.5e-54 216.1 207 60.4
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.5e-54 216.1 277 51.3
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 4.6e-54 215.7 212 60.8
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.0e-54 215.3 251 54.2
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 1.0e-53 214.5 277 51.3
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 1.0e-53 214.5 286 50.7
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 1.0e-53 214.5 265 53.6
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 3.0e-53 213.0 234 54.3
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.3e-52 209.1 274 51.1
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 4.3e-52 209.1 223 57.0
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 7.3e-52 208.4 173 73.4
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 7.3e-52 208.4 173 73.4
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.6e-51 207.2 276 50.4
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.6e-51 207.2 276 50.4
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.7e-51 205.7 275 49.8
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 4.7e-51 205.7 289 48.4
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 6.2e-51 205.3 289 47.1
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 1.4e-50 204.1 314 45.9
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 5.2e-50 202.2 221 56.1
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 5.2e-50 202.2 249 51.8
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 8.9e-50 201.4 289 48.4
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 9.9e-49 198.0 265 50.2
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 9.9e-49 198.0 208 62.0
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 2.2e-48 196.8 279 49.8
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 2.9e-48 196.4 266 50.4
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 3.7e-48 196.1 257 49.0
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 3.7e-48 196.1 257 49.0
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 2.4e-47 193.4 271 49.8
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.2e-46 191.0 281 49.5
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.0e-45 188.0 268 49.6
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.1e-44 184.5 235 52.8
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 1.9e-44 183.7 185 59.5
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 3.3e-44 183.0 203 57.1
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 5.6e-44 182.2 184 60.3
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 7.6e-41 171.8 205 53.2
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.7e-40 170.6 193 52.3
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 4.2e-39 166.0 227 47.6
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.6e-38 164.1 198 52.5
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 2.1e-38 163.7 200 54.5
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 1.0e-37 161.4 210 52.4
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.7e-37 160.6 213 48.4
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 3.9e-37 159.5 207 48.8
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.5e-36 157.5 139 65.5
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 3.6e-35 152.9 102 84.3
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 5.3e-34 149.1 256 46.5
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 2.6e-33 146.7 210 44.8
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 5.8e-33 145.6 217 45.2
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 2.2e-32 143.7 146 54.8
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 2.9e-32 143.3 156 52.6
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 4.2e-31 139.4 247 40.9
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 8.7e-29 131.7 214 45.3
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 1.9e-28 130.6 146 52.7
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.8e-26 124.0 137 58.4
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 3.1e-26 123.2 137 54.0
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 7.6e-25 118.6 76 85.5
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 3.8e-24 116.3 192 42.7
C01p49410 Brassica napus HOM05D005433 ORTHO05D040690 1.1e-23 114.8 138 59.4
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 3.5e-22 109.8 167 44.9
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 6.0e-22 109.0 225 38.2
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 5.1e-21 105.9 135 52.6
CARHR090070 Cardamine hirsuta HOM05D005433 ORTHO05D006675 6.7e-21 105.5 67 83.6
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 4.8e-19 99.4 135 43.7
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 2.4e-18 97.1 149 44.3
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 4.5e-17 92.8 219 36.5
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 6.5e-16 89.0 137 46.0
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.0e-13 81.6 155 40.0
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 1.3e-13 81.3 73 67.1
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 1.8e-13 80.9 134 41.0
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 1.1e-10 71.6 148 30.4
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 8.4e-08 62.0 63 58.7
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 4.2e-07 59.7 47 66.0
EL10Ac1g01129 Beta vulgaris HOM05D005433 ORTHO05D006675 5.5e-07 59.3 35 82.9
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 7.2e-07 58.9 43 67.4


User provided reference genes

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