Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g11710 Schrenkiella parvula HOM05D004137 ORTHO05D004804 7.1e-29 130.2 79 100.0
A05p35990 Brassica napus HOM05D004137 ORTHO05D004804 6.2e-17 90.5 60 76.7
BraA05t22405Z Brassica rapa HOM05D004137 ORTHO05D004804 6.2e-17 90.5 60 76.7
Thhalv10022151m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 2.0e-15 85.5 57 71.9
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 59.3
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 57.6
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 57.6
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 57.6
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 57.6
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 9.3e-13 76.6 59 57.6
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 2.1e-12 75.5 68 54.4
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 2.7e-12 75.1 59 55.9
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 1.0e-11 73.2 59 55.9
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 1.0e-11 73.2 63 52.4
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 1.8e-11 72.4 63 52.4
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 8.7e-11 70.1 63 50.8
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.5e-10 69.3 59 52.5
AL3G25410 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 2.5e-10 68.6 52 63.5
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 3.3e-10 68.2 59 54.2
CARHR088170 Cardamine hirsuta HOM05D004137 ORTHO05D004804 7.4e-10 67.0 53 64.2
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 1.6e-09 65.9 63 49.2
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 1.6e-09 65.9 63 49.2
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.6e-09 65.9 58 50.0
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 1.6e-09 65.9 59 52.5
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 2.1e-09 65.5 63 47.6
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 2.1e-09 65.5 63 47.6
AT3G13500 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 3.7e-09 64.7 52 57.7
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 6.2e-09 63.9 63 47.6
BcaB02g10824 Brassica carinata HOM05D004137 ORTHO05D004804 1.1e-08 63.2 57 56.1
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 2.6e-07 58.5 59 49.2
Carub.0003s1297 Capsella rubella HOM05D004137 ORTHO05D004804 4.5e-07 57.8 56 55.4
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 1.7e-06 55.8 59 42.4
Aa31LG10G1170 Aethionema arabicum HOM05D004137 ORTHO05D004804 2.2e-06 55.5 58 51.7
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 3.8e-06 54.7 59 40.7
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 4.9e-06 54.3 59 44.1
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 4.9e-06 54.3 59 42.4
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 6.4e-06 53.9 60 41.7
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 8.4e-06 53.5 59 47.5


User provided reference genes

Program Settings