Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 2.8e-42 174.9 89 100.0
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 5.7e-35 150.6 89 87.6
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 5.7e-35 150.6 89 87.6
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 5.7e-35 150.6 89 87.6
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 9.7e-35 149.8 89 87.6
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 1.7e-34 149.1 89 86.5
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 7.7e-32 140.2 89 84.3
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 1.2e-29 132.9 89 80.9
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 3.3e-27 124.8 91 78.0
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 9.1e-25 116.7 90 73.3
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 5.0e-23 110.9 78 71.8
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 4.0e-20 101.3 61 86.9
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 6.8e-20 100.5 87 60.9
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 3.7e-18 94.7 77 58.4
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 2.4e-17 92.0 77 61.0
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 5.4e-17 90.9 80 60.0
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 2.0e-16 89.0 82 59.8
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 7.7e-16 87.0 74 60.8
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.0e-15 86.7 87 57.5
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.0e-15 86.7 70 68.6
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 1.3e-15 86.3 78 56.4
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 1.7e-15 85.9 85 55.3
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 2.9e-15 85.1 55 74.5
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 5.0e-15 84.3 77 55.8
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 5.0e-15 84.3 80 60.0
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 8.6e-15 83.6 77 55.8
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 1.1e-14 83.2 57 70.2
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 1.1e-14 83.2 74 59.5
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 1.5e-14 82.8 72 63.9
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 1.9e-14 82.4 54 72.2
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 1.9e-14 82.4 54 72.2
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.5e-14 82.0 77 54.5
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.5e-14 82.0 77 54.5
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 3.3e-14 81.6 54 72.2
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 3.3e-14 81.6 70 61.4
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 4.2e-14 81.3 53 71.7
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 5.5e-14 80.9 77 55.8
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 5.5e-14 80.9 77 55.8
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 5.5e-14 80.9 69 60.9
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 9.5e-14 80.1 55 70.9
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 9.5e-14 80.1 84 52.4
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 9.5e-14 80.1 54 72.2
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 9.5e-14 80.1 100 47.0
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 1.2e-13 79.7 78 55.1
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 1.6e-13 79.3 54 68.5
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 1.6e-13 79.3 77 55.8
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 1.6e-13 79.3 58 67.2
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 2.1e-13 79.0 53 71.7
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 2.1e-13 79.0 77 54.5
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 2.1e-13 79.0 53 73.6
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 2.8e-13 78.6 50 74.0
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 2.8e-13 78.6 84 58.3
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 3.6e-13 78.2 74 55.4
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 3.6e-13 78.2 77 54.5
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 3.6e-13 78.2 63 61.9
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.7e-13 77.8 54 68.5
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 6.1e-13 77.4 53 69.8
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 8.0e-13 77.0 70 55.7
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 8.0e-13 77.0 59 66.1
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 2.3e-12 75.5 70 55.7
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 3.0e-12 75.1 59 64.4
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 4.0e-12 74.7 64 62.5
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 1.2e-11 73.2 74 52.7
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.5e-11 72.8 77 53.2
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 2.6e-11 72.0 61 55.7
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 4.4e-11 71.2 72 54.2
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 1.3e-10 69.7 68 54.4
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 1.3e-10 69.7 67 58.2
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 6.3e-10 67.4 51 60.8
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 8.3e-10 67.0 48 68.8
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 8.3e-10 67.0 62 56.5
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 1.4e-09 66.2 57 59.6
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 2.0e-08 62.4 62 56.5
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 2.0e-08 62.4 59 61.0


User provided reference genes

Program Settings