Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 5.1e-93 344.4 170 100.0
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.2e-91 339.0 170 97.6
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.7e-88 329.3 167 94.6
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 2.2e-88 328.9 169 92.9
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 2.2e-88 328.9 169 92.9
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 2.2e-88 328.9 169 92.9
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 2.9e-88 328.6 169 92.9
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 5.0e-88 327.8 169 92.9
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 1.1e-87 326.6 169 92.3
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.4e-87 326.2 169 92.3
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 4.2e-87 324.7 170 92.4
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 7.9e-86 320.5 168 92.3
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 3.9e-85 318.2 172 90.1
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 3.3e-84 315.1 170 90.0
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.8e-77 292.7 167 82.6
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 2.2e-51 206.1 146 65.8
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.4e-50 203.4 146 64.4
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.8e-50 203.0 146 63.7
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.8e-50 203.0 146 64.4
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 4.6e-49 198.4 146 63.7
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 5.9e-49 198.0 142 64.1
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 5.9e-49 198.0 146 62.3
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 1.0e-48 197.2 143 63.6
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 1.0e-48 197.2 143 63.6
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.0e-48 197.2 142 64.1
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 1.3e-48 196.8 142 64.1
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.3e-48 196.1 146 61.0
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 63.4
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 63.4
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 63.4
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 63.4
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 63.4
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 62.7
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 2.5e-47 192.6 142 62.7
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.5e-47 192.6 142 62.0
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 3.3e-47 192.2 146 60.3
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 5.6e-47 191.4 146 60.3
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 1.2e-46 190.3 148 60.1
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 1.6e-46 189.9 146 60.3
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.6e-46 189.9 146 59.6
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.6e-46 189.9 146 60.3
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 3.6e-46 188.7 140 62.1
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 4.7e-46 188.3 146 59.6
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 6.2e-46 188.0 146 59.6
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 8.0e-46 187.6 148 59.5
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.4e-45 186.8 143 60.1
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 1.8e-45 186.4 146 58.9
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 1.8e-45 186.4 143 60.1
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 3.1e-45 185.7 143 59.4
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 5.2e-45 184.9 146 60.3
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 6.8e-45 184.5 146 58.2
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 6.8e-45 184.5 146 58.2
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 8.9e-45 184.1 146 58.2
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 8.9e-45 184.1 146 57.5
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.2e-44 183.7 146 60.3
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 1.5e-44 183.3 140 62.1
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 1.5e-44 183.3 146 58.2
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 1.5e-44 183.3 146 58.2
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 2.0e-44 183.0 146 56.8
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 2.6e-44 182.6 146 60.3
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 4.4e-44 181.8 139 60.4
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 4.4e-44 181.8 142 61.3
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 4.4e-44 181.8 146 57.5
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 5.8e-44 181.4 148 58.8
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 5.8e-44 181.4 139 61.2
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 7.5e-44 181.0 136 63.2
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 9.8e-44 180.6 146 58.9
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 9.8e-44 180.6 143 58.0
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.3e-43 180.3 146 58.9
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 1.3e-43 180.3 146 58.9
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 1.7e-43 179.9 140 59.3
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 1.7e-43 179.9 139 59.7
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.7e-43 179.9 146 58.9
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.7e-43 179.9 136 61.0
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 2.2e-43 179.5 146 60.3
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.2e-43 179.5 144 57.6
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 2.2e-43 179.5 140 60.0
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 3.7e-43 178.7 139 59.7
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 3.7e-43 178.7 139 59.7
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 4.9e-43 178.3 136 61.0
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 4.9e-43 178.3 136 61.0
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 6.4e-43 177.9 140 60.0
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 6.4e-43 177.9 148 57.4
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 8.3e-43 177.6 140 60.7
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 1.1e-42 177.2 142 58.5
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 1.1e-42 177.2 141 58.2
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 1.4e-42 176.8 140 60.0
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.4e-42 176.8 140 58.6
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.4e-42 176.8 133 62.4
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 2.4e-42 176.0 133 60.9
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 3.2e-42 175.6 141 58.9
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 3.2e-42 175.6 139 57.6
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 9.2e-42 174.1 140 57.1
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 9.2e-42 174.1 138 58.0
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 1.2e-41 173.7 139 59.0
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 4.6e-41 171.8 139 57.6
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 4.6e-41 171.8 139 57.6
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 4.6e-41 171.8 133 58.6
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 6.0e-41 171.4 136 58.1
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 6.0e-41 171.4 148 57.4
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 7.8e-41 171.0 144 55.6
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 7.8e-41 171.0 136 59.6
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 7.8e-41 171.0 138 58.7
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.3e-40 170.2 140 59.3
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.7e-40 169.9 144 54.9
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 1.7e-40 169.9 140 56.4
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.3e-40 169.5 140 56.4
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 2.3e-40 169.5 140 56.4
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 3.0e-40 169.1 139 58.3
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 3.0e-40 169.1 162 53.1
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 5.0e-40 168.3 142 56.3
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 6.6e-40 167.9 138 59.4
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 1.1e-39 167.2 140 57.1
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 1.5e-39 166.8 138 58.7
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 4.3e-39 165.2 136 53.7
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 4.7e-38 161.8 144 53.5
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 6.2e-38 161.4 140 55.0
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.4e-37 160.2 142 52.1
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 1.2e-36 157.1 133 54.1
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.7e-35 153.3 140 51.4
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.7e-35 153.3 114 58.8
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 7.1e-34 147.9 133 54.1
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 3.5e-33 145.6 107 65.4
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 8.6e-32 141.0 170 42.9
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 2.3e-29 132.9 164 40.2
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.5e-28 130.2 110 61.8
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.7e-27 126.7 161 39.8
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 1.6e-25 120.2 160 41.2
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-24 114.8 81 60.5
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.4e-21 107.1 159 38.4
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 7.6e-20 101.3 149 38.3
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 9.9e-20 100.9 79 55.7
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.7e-19 100.1 142 40.1
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.7e-19 100.1 154 35.7
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 3.8e-19 99.0 111 48.6
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.6e-17 93.6 153 34.0
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 7.8e-17 91.3 158 36.7
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 6.6e-16 88.2 133 33.8
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 4.3e-15 85.5 152 32.9
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 1.5e-12 77.0 71 46.5
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 5.8e-12 75.1 111 36.9
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 5.8e-12 75.1 67 53.7
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 7.6e-12 74.7 65 56.9
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.4e-10 70.5 63 52.4
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 4.2e-10 68.9 68 48.5
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.7e-06 55.8 85 36.5


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