Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 1.9e-96 355.9 187 100.0
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 3.1e-83 312.0 188 87.8
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 7.7e-82 307.4 187 87.7
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.3e-81 306.6 188 86.7
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.3e-81 306.6 187 85.0
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.5e-80 302.4 187 86.1
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 4.8e-76 288.1 188 81.9
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 8.2e-76 287.3 188 81.4
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 3.1e-75 285.4 188 81.9
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.3e-73 280.0 188 80.9
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 1.1e-72 276.9 190 80.5
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 2.1e-71 272.7 187 79.7
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-70 270.0 195 76.9
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-70 270.0 195 76.9
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 5.5e-64 248.1 192 71.9
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 5.3e-59 231.5 189 66.1
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.0e-57 227.3 185 64.9
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.2e-50 203.8 183 63.4
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 5.9e-50 201.4 185 58.4
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.7e-49 199.9 186 61.8
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.1e-48 197.2 191 60.7
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.5e-48 196.8 179 59.8
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 2.5e-48 196.1 178 57.9
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 7.2e-48 194.5 185 58.9
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 9.4e-48 194.1 178 57.3
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 9.4e-48 194.1 185 60.5
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.6e-47 193.4 183 59.6
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 3.6e-47 192.2 182 57.7
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 4.7e-47 191.8 183 61.2
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.0e-46 190.7 199 52.8
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 5.2e-46 188.3 181 58.6
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 5.2e-46 188.3 179 58.1
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.2e-45 187.2 183 56.8
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 1.5e-45 186.8 185 55.7
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.6e-45 186.0 152 65.8
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 2.6e-45 186.0 186 53.8
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 4.4e-45 185.3 178 57.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.4e-45 185.3 181 60.2
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.4e-45 185.3 181 60.2
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 5.7e-45 184.9 190 55.8
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 7.5e-45 184.5 189 57.7
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.7e-44 183.3 156 60.3
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 1.7e-44 183.3 196 57.1
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.2e-44 183.0 179 59.2
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.2e-44 183.0 182 56.6
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.8e-44 182.6 162 64.2
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.9e-44 181.8 175 58.3
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 6.3e-44 181.4 135 68.1
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 6.3e-44 181.4 192 55.7
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 8.3e-44 181.0 183 55.2
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.1e-43 180.6 181 59.7
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.4e-43 179.5 179 58.1
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.1e-43 179.1 179 58.1
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 3.1e-43 179.1 144 61.8
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 4.1e-43 178.7 129 67.4
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 4.1e-43 178.7 185 52.4
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 5.4e-43 178.3 187 56.1
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.0e-42 176.4 180 55.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 2.0e-42 176.4 133 66.2
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 2.7e-42 176.0 171 56.1
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.7e-42 176.0 192 54.2
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.5e-42 175.6 175 59.4
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.5e-42 175.3 179 59.2
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 4.5e-42 175.3 181 54.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 7.7e-42 174.5 180 57.2
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 7.7e-42 174.5 189 54.0
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 3.8e-41 172.2 161 55.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 3.8e-41 172.2 130 66.2
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 5.0e-41 171.8 190 51.6
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 8.6e-41 171.0 157 56.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 3.3e-40 169.1 152 60.5
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 5.6e-40 168.3 180 54.4
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 7.2e-40 167.9 186 54.8
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.2e-39 167.2 180 55.0
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 1.2e-39 167.2 186 50.5
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.2e-39 167.2 157 58.6
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 6.1e-39 164.9 181 55.8
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.8e-38 163.3 188 51.6
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.8e-38 163.3 181 54.1
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 2.3e-38 162.9 187 51.3
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 6.8e-38 161.4 116 69.0
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.2e-37 160.6 191 51.8
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 5.7e-37 158.3 121 66.9
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 3.7e-36 155.6 153 53.6
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 4.9e-36 155.2 177 55.4
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.4e-35 153.7 186 51.6
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.1e-35 152.1 160 55.0
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 4.1e-35 152.1 189 47.6
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 7.0e-35 151.4 173 49.7
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 9.2e-35 151.0 174 54.0
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 5.6e-32 141.7 137 51.1
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 7.3e-32 141.4 148 52.7
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 8.0e-31 137.9 90 72.2
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.0e-30 137.5 126 57.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 6.8e-30 134.8 88 70.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 2.0e-29 133.3 109 61.5
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.8e-29 131.7 140 56.4
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 6.4e-28 128.3 179 46.9
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.9e-27 126.7 153 53.6
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.9e-27 126.7 140 50.0
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.4e-22 110.5 114 57.9
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 4.0e-22 109.0 135 47.4
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 2.0e-21 106.7 151 42.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.6e-21 106.3 129 51.9
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 3.4e-21 105.9 182 42.9
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 2.4e-19 99.8 70 64.3
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.4e-14 84.0 135 45.9


User provided reference genes

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