Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 2.0e-71 272.3 134 100.0
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 1.7e-70 269.2 134 97.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 1.7e-70 269.2 134 97.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 1.7e-70 269.2 134 97.8
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.7e-70 268.1 134 97.0
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.8e-70 267.7 134 97.0
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 6.3e-70 267.3 134 97.0
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.1e-69 266.5 134 96.3
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 1.1e-69 266.5 134 97.8
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.8e-69 265.8 134 95.5
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 4.1e-69 264.6 134 95.5
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 4.5e-68 261.2 143 91.6
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 4.5e-68 261.2 144 91.0
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 7.7e-68 260.4 143 90.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 1.0e-67 260.0 147 89.1
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.3e-67 259.6 143 90.9
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 2.9e-67 258.5 134 94.0
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 2.9e-67 258.5 141 91.5
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 2.9e-67 258.5 141 91.5
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.5e-58 229.6 135 84.4
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 7.5e-55 217.2 135 82.2
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 4.5e-52 208.0 131 77.1
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.5e-51 204.1 129 76.0
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.2e-50 201.4 131 74.0
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.2e-50 201.4 131 74.0
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 5.5e-50 201.1 129 76.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 5.5e-50 201.1 131 74.0
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 7.2e-50 200.7 131 74.0
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 9.4e-50 200.3 134 74.6
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 74.0
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.6e-49 199.5 131 74.8
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.1e-49 199.1 131 73.3
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 74.0
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 72.5
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 72.5
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 4.7e-49 198.0 130 73.1
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 73.3
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.1e-49 197.6 131 72.5
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 8.0e-49 197.2 131 74.8
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 73.3
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 74.8
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 72.5
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 72.5
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.4e-48 196.4 131 74.0
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 72.5
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 73.3
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 4.0e-48 194.9 131 71.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 5.2e-48 194.5 125 75.2
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 6.8e-48 194.1 129 71.3
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.2e-47 193.4 131 72.5
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.2e-47 193.4 131 71.8
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 71.8
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 2.6e-47 192.2 139 69.1
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 2.6e-47 192.2 125 72.8
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 3.4e-47 191.8 131 70.2
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 4.4e-47 191.4 131 69.5
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 4.4e-47 191.4 129 69.8
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 4.4e-47 191.4 131 70.2
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 5.7e-47 191.0 130 69.2
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 7.5e-47 190.7 123 74.8
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 7.5e-47 190.7 127 72.4
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 7.5e-47 190.7 131 70.2
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 1.3e-46 189.9 128 72.7
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.3e-46 189.9 129 70.5
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 6.3e-46 187.6 131 69.5
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 8.3e-46 187.2 129 67.4
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 8.3e-46 187.2 129 70.5
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-45 186.8 124 72.6
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-45 186.8 124 72.6
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.4e-45 186.4 131 67.2
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 1.4e-45 186.4 127 67.7
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.4e-45 186.4 134 67.2
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.8e-45 186.0 128 66.4
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.4e-45 185.7 127 70.1
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 3.1e-45 185.3 133 64.7
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 7.0e-45 184.1 131 68.7
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 7.0e-45 184.1 130 67.7
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 7.0e-45 184.1 130 67.7
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 9.1e-45 183.7 124 73.4
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 1.2e-44 183.3 127 68.5
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 2.0e-44 182.6 122 71.3
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 2.0e-44 182.6 128 68.0
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.7e-44 182.2 128 68.0
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 2.7e-44 182.2 131 66.4
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 4.5e-44 181.4 128 68.0
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 5.9e-44 181.0 136 67.6
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 7.7e-44 180.6 134 65.7
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.7e-43 179.5 124 71.0
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.7e-43 179.5 126 70.6
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 3.8e-43 178.3 127 66.9
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 3.8e-43 178.3 127 66.9
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 5.0e-43 177.9 127 66.9
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 8.6e-43 177.2 127 66.9
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 1.9e-42 176.0 128 67.2
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 4.2e-42 174.9 128 65.6
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 7.2e-42 174.1 128 64.1
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 7.2e-42 174.1 127 68.5
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 7.2e-42 174.1 129 63.6
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.6e-41 172.9 130 63.8
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 2.1e-41 172.6 131 63.4
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 2.1e-41 172.6 154 55.8
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 2.8e-41 172.2 129 66.7
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 2.8e-41 172.2 129 65.9
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 4.7e-41 171.4 129 63.6
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 1.4e-40 169.9 128 64.1
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.8e-40 169.5 135 61.5
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 7.5e-39 164.1 130 62.3
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.7e-38 162.9 169 50.9
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 2.4e-37 159.1 129 62.0
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.6e-36 156.4 127 64.6
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 1.7e-35 152.9 98 72.4
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.1e-34 150.2 74 97.3
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.4e-32 143.3 127 59.1
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 2.6e-31 139.0 130 53.8
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 5.8e-31 137.9 126 56.3
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 8.3e-30 134.0 95 67.4
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.2e-29 132.1 129 51.9
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.2e-29 132.1 93 65.6
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 4.1e-29 131.7 129 51.2
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 1.0e-27 127.1 125 49.6
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.5e-23 113.2 69 75.4
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 4.4e-23 111.7 70 75.7
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 3.7e-22 108.6 70 70.0
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.1e-21 107.1 69 71.0
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.4e-21 106.7 74 66.2
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.2e-21 105.5 70 68.6
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.6e-20 103.2 77 64.9
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 2.7e-20 102.4 71 69.0
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.6e-20 101.7 69 68.1
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 4.6e-20 101.7 118 41.5
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.0e-19 100.5 62 80.6
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.0e-19 100.5 62 80.6
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.9e-18 96.3 68 63.2
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 3.3e-18 95.5 62 75.8
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 5.6e-18 94.7 62 74.2
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 1.2e-17 93.6 72 55.6
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 1.2e-17 93.6 62 74.2
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 7.6e-15 84.3 66 62.1
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.1e-13 80.5 53 66.0
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 9.2e-13 77.4 118 37.3
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.1e-12 76.3 50 72.0
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.7e-12 75.9 75 49.3
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-11 73.9 76 46.1
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 4.7e-09 65.1 104 29.8
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 1.2e-07 60.5 28 100.0
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 1.2e-07 60.5 28 100.0
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 1.2e-07 60.5 28 100.0
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 2.6e-07 59.3 49 55.1
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 5.8e-07 58.2 28 92.9
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 5.8e-07 58.2 28 92.9
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 7.6e-07 57.8 76 34.2
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.7e-06 56.6 48 50.0
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 6.4e-06 54.7 76 32.9


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