Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.7e-171 605.9 308 100.0
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 9.5e-146 520.4 308 87.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.5e-143 513.1 309 84.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 6.0e-140 501.1 301 86.0
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.3e-139 500.0 308 85.1
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.3e-138 495.0 351 76.6
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 5.8e-135 484.6 302 83.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.9e-134 482.3 298 84.2
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.1e-129 464.2 356 73.0
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.7e-126 456.4 308 78.2
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.7e-126 455.3 310 77.4
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 6.4e-126 454.5 398 65.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 5.1e-123 444.9 363 69.4
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.5e-111 406.8 316 69.3
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.9e-90 336.7 308 62.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.2e-87 327.4 310 61.0
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.5e-87 325.5 309 63.1
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.7e-86 323.6 308 61.4
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.7e-86 323.6 309 62.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 3.8e-86 322.4 309 62.8
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 6.5e-86 321.6 303 61.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 4.2e-85 318.9 212 82.1
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 2.7e-84 316.2 301 60.8
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.0e-83 314.3 303 59.1
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.5e-79 300.4 299 58.5
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.6e-76 290.4 309 54.7
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.6e-76 289.3 300 58.3
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 6.1e-76 288.5 301 56.8
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 3.9e-75 285.8 306 54.2
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.7e-75 285.0 305 56.4
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.1e-74 284.3 304 54.9
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.5e-74 283.1 297 57.9
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 3.3e-74 282.7 309 57.0
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.7e-73 280.4 302 55.6
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 2.8e-73 279.6 299 57.2
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 2.8e-73 279.6 289 56.1
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.7e-73 279.3 307 55.7
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 1.4e-72 277.3 310 55.5
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.8e-72 276.9 299 56.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.8e-72 276.9 299 55.9
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 5.3e-72 275.4 306 54.9
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-71 274.2 306 54.9
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.5e-71 273.9 303 53.8
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.0e-70 268.9 293 54.3
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.0e-70 268.9 293 54.3
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.5e-70 268.5 303 52.1
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.4e-69 267.3 293 53.9
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.4e-69 267.3 299 51.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.9e-69 266.9 298 52.3
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 2.5e-69 266.5 290 54.8
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 3.2e-69 266.2 298 54.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 7.2e-69 265.0 289 53.6
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.6e-68 263.8 301 49.2
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.1e-68 263.5 309 53.4
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.7e-68 263.1 299 53.8
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.7e-68 263.1 294 55.4
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.7e-68 263.1 302 51.3
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 3.6e-68 262.7 323 49.5
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.6e-68 262.7 294 55.1
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 6.1e-68 261.9 309 52.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.0e-67 261.2 290 53.8
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.0e-67 261.2 290 53.8
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.0e-67 261.2 299 54.8
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.3e-67 260.0 301 51.2
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.9e-67 259.2 297 53.9
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.1e-66 257.7 303 52.1
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 3.3e-66 256.1 282 54.6
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 7.4e-66 255.0 302 53.6
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.3e-65 254.2 288 54.2
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 8.2e-65 251.5 283 53.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.4e-64 250.8 342 48.0
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.8e-64 250.4 297 51.5
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.4e-64 250.0 284 51.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.1e-64 249.2 320 49.4
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 5.3e-64 248.8 327 49.5
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 2.0e-63 246.9 265 57.4
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 4.5e-63 245.7 290 51.7
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.0e-62 244.6 300 52.3
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.4e-61 240.7 295 48.5
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.2e-61 238.4 195 69.2
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 7.2e-61 238.4 291 49.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.1e-60 236.9 306 50.0
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 4.7e-60 235.7 291 49.1
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 5.7e-58 228.8 289 49.8
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 2.8e-57 226.5 317 48.3
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.7e-57 226.1 292 49.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 2.2e-54 216.9 122 82.0
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 8.5e-54 214.9 282 45.0
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.3e-49 201.1 313 44.7
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.8e-49 199.9 107 83.2
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 5.3e-48 195.7 114 79.8
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 5.3e-48 195.7 124 74.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 3.8e-46 189.5 107 80.4
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.2e-44 184.5 135 63.7
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.0e-43 179.5 98 82.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 6.8e-43 178.7 138 61.6
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 4.4e-42 176.0 245 46.9
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.2e-41 173.7 283 41.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 6.3e-41 172.2 303 42.2
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.4e-40 169.1 98 81.6
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.2e-39 167.9 125 67.2
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 5.0e-38 162.5 88 80.7
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 6.6e-38 162.2 177 48.6
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.7e-34 149.1 130 61.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.2e-33 147.1 98 70.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 2.2e-33 147.1 225 47.1
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 4.9e-33 146.0 98 68.4
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.3e-30 137.9 212 46.2
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-15 87.8 184 39.7
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 3.5e-15 86.7 196 40.8
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.5e-15 86.7 214 36.0
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-14 84.3 98 48.0
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-14 84.3 98 48.0
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-14 84.3 98 48.0
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-14 84.3 98 48.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 4.7e-12 76.3 82 51.2
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 6.8e-11 72.4 40 80.0
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.2e-09 67.4 196 34.2
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.6e-07 61.2 204 31.4
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.6e-07 61.2 41 63.4
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 7.8e-07 58.9 113 41.6


User provided reference genes

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