Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 4.6e-94 347.8 168 100.0
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 8.1e-75 283.9 169 84.6
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 8.1e-75 283.9 169 84.0
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 4.0e-74 281.6 168 84.5
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 5.8e-73 277.7 168 82.7
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 7.6e-73 277.3 168 82.7
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.4e-71 273.1 169 82.2
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.2e-70 270.0 171 79.5
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 2.1e-70 269.2 171 79.5
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.5e-68 263.1 166 78.9
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 5.7e-68 261.2 171 78.4
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 3.2e-63 245.4 160 78.8
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 8.2e-59 230.7 155 75.5
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.3e-48 196.8 172 63.4
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.8e-40 168.7 138 60.9
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 8.5e-40 167.5 117 66.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.1e-39 167.2 140 57.9
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.9e-39 166.4 156 55.8
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.2e-39 165.6 132 60.6
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 5.5e-39 164.9 156 57.1
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.2e-38 163.7 159 56.0
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 1.2e-38 163.7 130 63.8
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 2.1e-38 162.9 112 69.6
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.1e-38 162.9 159 55.3
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 2.7e-38 162.5 152 57.2
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 3.6e-38 162.2 114 66.7
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 3.6e-38 162.2 99 77.8
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 8.0e-38 161.0 108 70.4
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.0e-37 160.6 163 55.2
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.0e-37 160.6 132 59.1
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.0e-37 160.6 143 56.6
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-37 160.2 132 59.1
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.4e-37 160.2 138 57.2
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.8e-37 159.8 90 77.8
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 3.0e-37 159.1 108 67.6
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-36 156.8 132 57.6
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 1.5e-36 156.8 159 53.5
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.5e-36 156.8 132 58.3
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 2.0e-36 156.4 97 75.3
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.0e-36 156.4 97 72.2
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 3.3e-36 155.6 153 52.3
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.5e-36 154.5 132 56.8
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 7.5e-36 154.5 79 83.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.7e-35 153.3 150 54.7
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.7e-35 153.3 157 55.4
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.7e-35 153.3 81 82.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.2e-35 152.9 90 74.4
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.2e-35 152.9 156 50.0
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 2.8e-35 152.5 146 55.5
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 3.7e-35 152.1 81 81.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 3.7e-35 152.1 84 83.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.8e-35 151.8 152 52.6
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 4.8e-35 151.8 124 58.1
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 6.3e-35 151.4 104 68.3
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 6.3e-35 151.4 102 70.6
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.1e-34 150.6 126 57.9
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.4e-34 150.2 107 68.2
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 1.8e-34 149.8 80 80.0
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.4e-34 149.4 158 48.1
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.4e-34 149.4 85 74.1
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 2.4e-34 149.4 131 57.3
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 3.1e-34 149.1 88 70.5
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 4.1e-34 148.7 87 73.6
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.2e-33 147.1 157 51.6
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.6e-33 146.7 127 55.9
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.6e-33 146.7 120 60.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.7e-33 146.0 84 73.8
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.5e-33 145.2 155 49.0
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.5e-33 145.2 83 79.5
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 7.7e-33 144.4 149 51.7
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.3e-32 143.7 79 79.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.3e-32 143.7 85 71.8
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.7e-32 143.3 85 70.6
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 5.0e-32 141.7 124 57.3
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.5e-31 140.2 105 63.8
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.5e-31 140.2 73 83.6
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 5.5e-31 138.3 100 64.0
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 9.4e-31 137.5 74 81.1
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.2e-30 137.1 66 87.9
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.7e-30 136.0 111 61.3
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.6e-30 135.6 96 66.7
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 6.1e-30 134.8 141 51.8
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 5.2e-29 131.7 85 71.8
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 2.6e-28 129.4 74 78.4
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 5.7e-28 128.3 134 49.3
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.7e-27 126.7 71 77.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.2e-27 126.3 63 87.3
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 8.3e-27 124.4 65 80.0
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.1e-26 124.0 167 45.5
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.4e-26 123.6 100 63.0
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.4e-26 123.6 66 80.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 4.1e-26 122.1 155 51.6
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 5.4e-26 121.7 132 47.7
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 5.9e-25 118.2 73 72.6
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.5e-23 113.6 72 61.1
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 6.1e-22 108.2 76 67.1
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.8e-21 106.7 65 72.3
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 9.8e-20 100.9 85 58.8
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 5.4e-18 95.1 63 57.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 7.0e-18 94.7 73 63.0
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 6.6e-08 61.6 36 75.0


User provided reference genes

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