Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g06840 Schrenkiella parvula HOM05D004639 ORTHO05D005201 1.9e-254 882.1 483 100.0
Thhalv10020704m.g Eutrema salsugineum HOM05D004639 ORTHO05D005201 2.1e-168 596.3 483 74.7
Carub.0003s0750 Capsella rubella HOM05D004639 ORTHO05D005201 1.0e-154 550.8 489 69.7
AL3G19300 Arabidopsis lyrata HOM05D004639 ORTHO05D005201 5.1e-146 521.9 452 73.9
BcaB04g16901 Brassica carinata HOM05D004639 ORTHO05D005201 3.8e-141 505.8 463 67.2
BraA07t27872Z Brassica rapa HOM05D004639 ORTHO05D005201 5.5e-140 501.9 463 63.3
BolC7t40577H Brassica oleracea HOM05D004639 ORTHO05D005201 1.9e-132 476.9 463 60.7
C07p01740 Brassica napus HOM05D004639 ORTHO05D005201 2.5e-132 476.5 463 60.9
A07p00740 Brassica napus HOM05D004639 ORTHO05D005201 3.7e-128 462.6 415 64.1
BcaC06g36658 Brassica carinata HOM05D004639 ORTHO05D005201 5.5e-116 422.2 424 61.6
BcaC08g44553 Brassica carinata HOM05D004639 ORTHO05D005201 2.9e-101 373.2 408 58.3
Aa31LG5G18470 Aethionema arabicum HOM05D004639 ORTHO05D005201 1.3e-93 347.8 576 46.4
AT3G07930 Arabidopsis thaliana HOM05D004639 ORTHO05D005201 1.6e-91 340.9 381 63.5
CARHR082660 Cardamine hirsuta HOM05D004639 ORTHO05D005201 1.7e-80 304.3 341 58.9
THA.LOC104805811 Tarenaya hassleriana HOM05D004639 ORTHO05D005201 2.3e-74 283.9 476 40.5
C06p20180 Brassica napus HOM05D004639 ORTHO05D005201 3.9e-69 266.5 363 51.2
BolC6t37199H Brassica oleracea HOM05D004639 ORTHO05D005201 3.9e-69 266.5 363 51.2
Prupe.4G286600 Prunus persica HOM05D004639 ORTHO05D005201 1.9e-68 264.2 191 64.4
MD00G1164900 Malus domestica HOM05D004639 ORTHO05D005201 1.4e-66 258.1 191 66.0
Cpa.g.sc15.68 Carica papaya HOM05D004639 ORTHO05D005201 2.6e-65 253.8 194 63.9
VMungo0540G1855 Vigna mungo HOM05D004639 ORTHO05D005201 3.7e-64 250.0 211 57.8
Thecc.04G056700 Theobroma cacao HOM05D004639 ORTHO05D005201 4.9e-64 249.6 191 64.9
Hma1.2p1_1077F.1_g254710 Hydrangea macrophylla HOM05D004639 ORTHO05D005201 6.4e-64 249.2 201 62.2
QL01p053168 Quercus lobata HOM05D004639 ORTHO05D005201 1.1e-63 248.4 194 62.4
Ciclev10028470m.g Citrus clementina HOM05D004639 ORTHO05D005201 4.1e-63 246.5 153 75.2
arahy.Tifrunner.gnm1.ann1.CP937L Arachis hypogaea HOM05D004639 ORTHO05D005201 5.4e-63 246.1 190 62.6
arahy.Tifrunner.gnm1.ann1.GWL1KB Arachis hypogaea HOM05D004639 ORTHO05D005201 5.4e-63 246.1 190 62.6
Actinidia23035 Actinidia chinensis HOM05D004639 ORTHO05D005201 7.1e-63 245.7 196 61.2
Dinv01634 Davidia involucrata HOM05D004639 ORTHO05D005201 2.7e-62 243.8 204 57.8
Aqoxy4G01839 Aquilegia oxysepala HOM05D004639 ORTHO05D005201 3.5e-62 243.4 167 67.7
Phvul.L000400 Phaseolus vulgaris HOM05D004639 ORTHO05D005201 4.6e-62 243.0 177 65.5
TAR376G0371 Trochodendron aralioides HOM05D004639 ORTHO05D005201 6.0e-62 242.7 170 70.6
QL01p053770 Quercus lobata HOM05D004639 ORTHO05D005201 2.3e-61 240.7 172 66.9
Nitab4.5_0010824g0010 Nicotiana tabacum HOM05D004639 ORTHO05D005201 3.9e-61 240.0 194 60.8
Rhsim11G0007200 Rhododendron simsii HOM05D004639 ORTHO05D005201 5.1e-61 239.6 164 67.1
TWI15G1026 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 8.6e-61 238.8 169 68.6
PSO384G4518 Papaver somniferum HOM05D004639 ORTHO05D005201 3.3e-60 236.9 172 64.0
PSO493G0020 Papaver somniferum HOM05D004639 ORTHO05D005201 3.3e-60 236.9 172 64.0
vmacro04281 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 7.3e-60 235.7 164 67.1
FAN19G3130 Fragaria x ananassa HOM05D004639 ORTHO05D005201 9.6e-60 235.3 197 57.9
TWI31G0951 Tripterygium wilfordii HOM05D004639 ORTHO05D005201 9.6e-60 235.3 169 68.0
FvH4_1g27870 Fragaria vesca HOM05D004639 ORTHO05D005201 1.2e-59 235.0 197 57.9
FAN26G1776 Fragaria x ananassa HOM05D004639 ORTHO05D005201 1.2e-59 235.0 197 57.9
Gohir.A09G007300 Gossypium hirsutum HOM05D004639 ORTHO05D005201 1.2e-59 235.0 152 72.4
Gorai.006G008100 Gossypium raimondii HOM05D004639 ORTHO05D005201 1.2e-59 235.0 152 72.4
Manes.18G143900 Manihot esculenta HOM05D004639 ORTHO05D005201 1.6e-59 234.6 163 68.7
CAN.G989.2 Capsicum annuum HOM05D004639 ORTHO05D005201 2.1e-59 234.2 188 61.2
Glyma.13G009500 Glycine max HOM05D004639 ORTHO05D005201 4.7e-59 233.0 186 62.4
Gohir.D09G006600 Gossypium hirsutum HOM05D004639 ORTHO05D005201 6.2e-59 232.6 152 71.7
vmacro22429 Vaccinium macrocarpon HOM05D004639 ORTHO05D005201 6.2e-59 232.6 164 66.5
Oeu061992.1 Olea europaea HOM05D004639 ORTHO05D005201 8.1e-59 232.3 195 59.5
CANSAT64G1383 Cannabis sativa HOM05D004639 ORTHO05D005201 1.1e-58 231.9 151 71.5
CANSAT64G2443 Cannabis sativa HOM05D004639 ORTHO05D005201 1.1e-58 231.9 151 71.5
Peaxi162Scf00331g00311 Petunia axillaris HOM05D004639 ORTHO05D005201 1.4e-58 231.5 159 66.7
CANSAT64G2852 Cannabis sativa HOM05D004639 ORTHO05D005201 3.1e-58 230.3 152 70.4
RcHm_v2.0_Chr3g0497491 Rosa chinensis HOM05D004639 ORTHO05D005201 1.2e-57 228.4 165 64.8
Cc00_g06760 Coffea canephora HOM05D004639 ORTHO05D005201 2.0e-57 227.6 168 63.1
Lj2g0020909 Lotus japonicus HOM05D004639 ORTHO05D005201 2.0e-57 227.6 178 62.9
Nitab4.5_0001799g0030 Nicotiana tabacum HOM05D004639 ORTHO05D005201 2.6e-57 227.3 152 68.4
Solyc02g021100.3 Solanum lycopersicum HOM05D004639 ORTHO05D005201 6.4e-56 222.6 188 58.0
Atru.chr9.65 Acer truncatum HOM05D004639 ORTHO05D005201 8.4e-56 222.2 158 67.1
Migut.A01100 Erythranthe guttata HOM05D004639 ORTHO05D005201 8.4e-56 222.2 200 57.5
Sopen02g005400 Solanum pennellii HOM05D004639 ORTHO05D005201 1.1e-55 221.9 188 58.0
SGA_v2.0_scaffold291G47333 Striga asiatica HOM05D004639 ORTHO05D005201 1.9e-55 221.1 196 55.6
GSVIVG01003641001 Vitis vinifera HOM05D004639 ORTHO05D005201 3.2e-55 220.3 147 69.4
Lsat_1_v5_gn_3_140620 Lactuca sativa HOM05D004639 ORTHO05D005201 5.4e-55 219.5 155 65.2
Potri.014G189400 Populus trichocarpa HOM05D004639 ORTHO05D005201 9.3e-55 218.8 172 60.5
DCAR_016067 Daucus carota HOM05D004639 ORTHO05D005201 1.2e-54 218.4 175 59.4
Potri.014G187300 Populus trichocarpa HOM05D004639 ORTHO05D005201 1.6e-54 218.0 156 64.1
Nn5g27169 Nelumbo nucifera HOM05D004639 ORTHO05D005201 2.7e-54 217.2 191 59.2
Potri.014G187000 Populus trichocarpa HOM05D004639 ORTHO05D005201 2.7e-54 217.2 156 64.1
ATR0068G005 Amborella trichopoda HOM05D004639 ORTHO05D005201 4.6e-54 216.5 190 56.8
Sabra12G0026100 Salix brachista HOM05D004639 ORTHO05D005201 4.6e-54 216.5 169 62.7
Sabra19G0060900 Salix brachista HOM05D004639 ORTHO05D005201 4.6e-54 216.5 172 59.9
Sabra19G0061000 Salix brachista HOM05D004639 ORTHO05D005201 4.6e-54 216.5 172 59.9
SabraUnG0000100 Salix brachista HOM05D004639 ORTHO05D005201 4.6e-54 216.5 172 59.9
SabraUnG0000200 Salix brachista HOM05D004639 ORTHO05D005201 4.6e-54 216.5 172 59.9
SalBow6G0181 Salvia bowleyana HOM05D004639 ORTHO05D005201 2.3e-53 214.2 202 55.9
SalBow6G5700 Salvia bowleyana HOM05D004639 ORTHO05D005201 2.3e-53 214.2 202 55.9
AUR62017756 Chenopodium quinoa HOM05D004639 ORTHO05D005201 3.0e-53 213.8 164 60.4
MBI03_g13041_MAGBIO Magnolia biondii HOM05D004639 ORTHO05D005201 3.0e-53 213.8 174 62.1
HanXRQChr16g0532761 Helianthus annuus HOM05D004639 ORTHO05D005201 5.1e-53 213.0 140 68.6
Potri.012G037700 Populus trichocarpa HOM05D004639 ORTHO05D005201 5.1e-53 213.0 147 67.3
Ah.05g167280 Amaranthus hybridus HOM05D001485 ORTHO05D001407 1.1e-52 211.8 168 58.3
MSTRG.8994 Avicennia marina HOM05D004639 ORTHO05D005201 4.3e-52 209.9 182 59.9
HanXRQChr12g0386021 Helianthus annuus HOM05D004639 ORTHO05D005201 4.3e-52 209.9 140 68.6
MELO3C022885.2 Cucumis melo HOM05D004639 ORTHO05D005201 1.3e-51 208.4 206 52.9
ECA234G3785 Erigeron canadensis HOM05D004639 ORTHO05D005201 1.3e-51 208.4 168 56.0
Lj2g0022882 Lotus japonicus HOM05D004639 ORTHO05D005201 1.3e-51 208.4 169 59.8
ClCG08G005050 Citrullus lanatus HOM05D004639 ORTHO05D005201 1.6e-51 208.0 206 52.4
Medtr0037s0250 Medicago truncatula HOM05D004639 ORTHO05D005201 2.1e-51 207.6 181 55.2
SEGI_27362 Sequoiadendron giganteum HOM05D004639 ORTHO05D005201 2.1e-51 207.6 144 68.8
ECA234G0087 Erigeron canadensis HOM05D004639 ORTHO05D005201 4.8e-51 206.5 171 56.7
Sabra19G0060700 Salix brachista HOM05D004639 ORTHO05D005201 6.2e-51 206.1 146 64.4
CiPaw.15G093500 Carya illinoinensis HOM05D004639 ORTHO05D005201 8.1e-51 205.7 179 59.8
Eucgr.B01580 Eucalyptus grandis HOM05D004639 ORTHO05D005201 1.1e-50 205.3 177 56.5
CsaV3_5G037160 Cucumis sativus L. HOM05D004639 ORTHO05D005201 1.4e-50 204.9 206 52.4
Hund25534 Selenicereus undatus HOM05D004639 ORTHO05D005201 1.4e-50 204.9 158 61.4
CARHR082670 Cardamine hirsuta HOM05D004639 ORTHO05D005201 2.4e-50 204.1 105 91.4
Medtr0037s0060 Medicago truncatula HOM05D004639 ORTHO05D005201 2.0e-49 201.1 180 54.4
PGR031G3121 Punica granatum HOM05D004639 ORTHO05D005201 3.4e-49 200.3 155 61.3
HPP92_007024 Vanilla planifolia HOM05D004639 ORTHO05D005201 3.4e-49 200.3 148 60.1
EL10As7g23724 Beta vulgaris HOM05D004639 ORTHO05D005201 4.9e-48 196.4 183 51.9
Duzib235G0802 Durio zibethinus HOM05D004639 ORTHO05D005201 9.3e-47 192.2 160 60.6
Potri.014G187766 Populus trichocarpa HOM05D004639 ORTHO05D005201 1.2e-46 191.8 156 58.3
HPP92_007076 Vanilla planifolia HOM05D004639 ORTHO05D005201 1.6e-46 191.4 141 61.0
SHI25031 Sapria himalayana HOM05D004639 ORTHO05D005201 3.5e-46 190.3 149 57.7
CDE02G2478 Ceratophyllum demersum HOM05D004639 ORTHO05D005201 1.9e-44 184.5 187 51.9
Lalb_Chr00c23g0406301 Lupinus albus HOM05D004639 ORTHO05D005201 1.1e-42 178.7 147 60.5
Sabra19G0060200 Salix brachista HOM05D004639 ORTHO05D005201 1.1e-42 178.7 171 52.0
Mapoly0049s0024 Marchantia polymorpha HOM05D004639 ORTHO05D005201 2.4e-42 177.6 168 53.0
Lj2g0018447 Lotus japonicus HOM05D004639 ORTHO05D005201 1.5e-41 174.9 193 48.2
Pp3c15_4380 Physcomitrium patens HOM05D004639 ORTHO05D005201 2.6e-41 174.1 133 60.2
Nitab4.5_0000843g0080 Nicotiana tabacum HOM05D004639 ORTHO05D005201 3.4e-41 173.7 163 55.2
unitig_22.g6364 Utricularia gibba HOM05D004639 ORTHO05D005201 4.5e-41 173.3 141 63.1
AUR62032895 Chenopodium quinoa HOM05D004639 ORTHO05D005201 7.6e-41 172.6 168 51.8
Sc22g0004560 Simmondsia chinensis HOM05D004639 ORTHO05D005201 9.3e-39 165.6 141 56.0
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 1.6e-38 164.9 103 74.8
CBR_g51322 Chara braunii HOM05D004639 ORTHO05D005201 1.0e-37 162.2 133 55.6
SMO334G0025 Selaginella moellendorffii HOM05D004639 ORTHO05D005201 9.6e-36 155.6 135 50.4
Os09g0101100 Oryza sativa ssp. japonica HOM05D004639 ORTHO05D005201 8.1e-35 152.5 176 43.2
Zm00001eb264110 Zea mays HOM05D004639 ORTHO05D005201 1.1e-34 152.1 187 41.7
Dinv08242 Davidia involucrata HOM05D004639 ORTHO05D005201 6.9e-34 149.4 94 72.3
Sed0017627 Sechium edule HOM05D004639 ORTHO05D005201 2.0e-33 147.9 142 52.8
PRCOL_00006916 Prasinoderma coloniale HOM05D004639 ORTHO05D005201 2.5e-31 141.0 134 50.7
TPR.G9531 Trifolium pratense HOM05D004639 ORTHO05D005201 2.1e-30 137.9 99 60.6
Lalb_Chr18g0049251 Lupinus albus HOM05D004639 ORTHO05D005201 7.4e-28 129.4 98 63.3
Lalb_Chr00c55g0413711 Lupinus albus HOM05D004639 ORTHO05D005201 1.3e-27 128.6 99 62.6
Cre05.g234250 Chlamydomonas reinhardtii HOM05D004639 ORTHO05D005201 1.4e-26 125.2 133 42.1
CBR_g37349 Chara braunii HOM05D000004 ORTHO05D000002 6.9e-26 122.9 148 46.6
Sabra19G0060600 Salix brachista HOM05D004639 ORTHO05D005201 5.8e-25 119.8 95 58.9
COL.COLO4_05916 Corchorus olitorius HOM05D004639 ORTHO05D005201 1.3e-24 118.6 134 49.3
HPP92_015991 Vanilla planifolia HOM05D004639 ORTHO05D005201 5.0e-24 116.7 95 55.8
Gohir.D02G140450 Gossypium hirsutum HOM05D004639 ORTHO05D005201 3.5e-22 110.5 90 61.1
QL93p0107_0438 Quercus lobata HOM05D004639 ORTHO05D005201 5.1e-21 106.7 59 76.3
Sabra19G0060300 Salix brachista HOM05D004639 ORTHO05D005201 6.7e-21 106.3 81 61.7
Gorai.005G156200 Gossypium raimondii HOM05D004639 ORTHO05D005201 1.1e-20 105.5 90 58.9
TPR.G22982 Trifolium pratense HOM05D004639 ORTHO05D005201 2.2e-16 91.3 82 53.7
QL01p054228 Quercus lobata HOM05D004639 ORTHO05D005201 3.8e-16 90.5 101 46.5
Haze_08020 Corylus avellana HOM05D004639 ORTHO05D005201 1.1e-15 89.0 59 69.5
QL02p058806 Quercus lobata HOM05D004639 ORTHO05D005201 1.9e-15 88.2 103 44.7
CSS0047186 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 7.2e-15 86.3 69 59.4
CSS0021628 Camellia sinensis var. sinensis HOM05D004639 ORTHO05D005201 1.2e-14 85.5 76 55.3
Psat1g014800 Pisum sativum HOM05D004639 ORTHO05D005201 1.2e-14 85.5 71 56.3
FAN23G0569 Fragaria x ananassa HOM05D004639 ORTHO05D005201 3.9e-13 80.5 77 54.5
Medtr6g033105 Medicago truncatula HOM05D004639 ORTHO05D005201 9.7e-12 75.9 119 42.0
Medtr6g034730 Medicago truncatula HOM05D004639 ORTHO05D005201 5.3e-10 70.1 62 51.6
AagrBONN_evm.TU.Sc2ySwM_228.991 Anthoceros agrestis HOM05D004639 ORTHO05D005201 5.0e-08 63.5 47 59.6
SHI28181 Sapria himalayana HOM05D000002 ORTHO05D000047 3.2e-07 60.8 54 55.6
unitig_22.g6365 Utricularia gibba HOM05D004639 ORTHO05D005201 3.2e-07 60.8 36 69.4


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