Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g05800 Schrenkiella parvula HOM05D005099 ORTHO05D006087 4.9e-97 357.8 186 100.0
AT3G06840 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 3.9e-70 268.5 189 76.2
CARHR081450 Cardamine hirsuta HOM05D005099 ORTHO05D006087 7.4e-69 264.2 188 76.6
AL3G17960 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 2.2e-68 262.7 189 75.7
Thhalv10021591m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 1.6e-63 246.5 191 77.0
BNapus_Darmor_BZH_scaffold_117p00120 Brassica napus HOM05D005099 ORTHO05D006087 3.9e-62 241.9 190 74.7
BraA01t04411Z Brassica rapa HOM05D005099 ORTHO05D006087 3.9e-62 241.9 190 74.7
Carub.0003s0637 Capsella rubella HOM05D005099 ORTHO05D006087 9.7e-61 237.3 187 71.7
BcaC09g47923 Brassica carinata HOM05D005099 ORTHO05D006087 5.3e-59 231.5 189 73.0
BolC1t05583H Brassica oleracea HOM05D005099 ORTHO05D006087 5.3e-59 231.5 189 73.0
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 8.5e-57 224.2 195 63.1
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 1.5e-53 213.4 197 62.4
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 3.1e-51 205.7 190 60.0
THA.LOC104818909 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 5.3e-51 204.9 209 55.0
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 2.6e-50 202.6 198 63.6
Duzib151G0929 Durio zibethinus HOM05D005099 ORTHO05D006087 1.1e-48 197.2 198 58.1
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 1.0e-46 190.7 192 57.8
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 3.0e-46 189.1 190 58.4
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 8.8e-46 187.6 200 57.0
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 2.6e-45 186.0 194 60.3
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 3.3e-45 185.7 187 58.3
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 4.4e-45 185.3 193 59.6
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 5.7e-45 184.9 190 60.0
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 5.7e-45 184.9 195 57.9
Aa31LG5G17420 Aethionema arabicum HOM05D005099 ORTHO05D006087 1.3e-44 183.7 189 57.7
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 1.3e-44 183.7 203 55.2
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 6.3e-44 181.4 194 56.7
Thhalv10004959m.g Eutrema salsugineum HOM05D005099 ORTHO05D006087 1.1e-43 180.6 208 56.2
FvH4_4g18620 Fragaria vesca HOM05D005099 ORTHO05D006087 1.8e-43 179.9 189 58.2
FAN12G1484 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.8e-43 179.9 189 58.2
FAN12G1671 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.8e-43 179.9 189 58.2
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 1.8e-43 179.9 202 53.0
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 2.4e-43 179.5 199 60.3
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 3.1e-43 179.1 190 56.3
Cc03_g01550 Coffea canephora HOM05D005099 ORTHO05D006087 4.1e-43 178.7 192 58.3
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 5.3e-43 178.3 193 56.5
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 7.0e-43 177.9 195 54.4
Glyma.09G042500 Glycine max HOM05D005099 ORTHO05D006087 9.1e-43 177.6 189 55.0
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 9.1e-43 177.6 187 59.4
VMungo1309G2116 Vigna mungo HOM05D005099 ORTHO05D006087 9.1e-43 177.6 193 56.5
QL06p010333 Quercus lobata HOM05D005099 ORTHO05D006087 3.5e-42 175.6 200 53.0
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 7.7e-42 174.5 186 55.9
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 7.7e-42 174.5 189 53.4
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 1.0e-41 174.1 190 56.3
CANSAT78G2455 Cannabis sativa HOM05D005099 ORTHO05D006087 1.3e-41 173.7 206 53.4
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 1.3e-41 173.7 188 57.4
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 2.9e-41 172.6 187 56.7
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 5.0e-41 171.8 186 55.4
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 6.5e-41 171.4 188 55.9
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 8.5e-41 171.0 194 57.2
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 8.5e-41 171.0 194 57.2
FAN07G0877 Fragaria x ananassa HOM05D005099 ORTHO05D006087 1.1e-40 170.6 188 55.9
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.1e-40 170.6 197 56.9
arahy.Tifrunner.gnm1.ann1.2UKM1V Arachis hypogaea HOM05D005099 ORTHO05D006087 1.5e-40 170.2 180 56.7
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 1.9e-40 169.9 171 56.7
FAN17G2615 Fragaria x ananassa HOM05D005099 ORTHO05D006087 2.5e-40 169.5 187 56.7
RcHm_v2.0_Chr4g0423321 Rosa chinensis HOM05D005099 ORTHO05D006087 2.5e-40 169.5 191 56.0
Sed0019517 Sechium edule HOM05D005099 ORTHO05D006087 2.5e-40 169.5 189 54.0
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 5.5e-40 168.3 204 54.9
arahy.Tifrunner.gnm1.ann1.2F59RJ Arachis hypogaea HOM05D005099 ORTHO05D006087 7.2e-40 167.9 193 53.4
Glyma.15G150400 Glycine max HOM05D005099 ORTHO05D006087 7.2e-40 167.9 192 53.1
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 7.2e-40 167.9 188 55.3
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 9.4e-40 167.5 189 55.0
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 1.2e-39 167.2 192 54.2
Nitab4.5_0003767g0020 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.2e-39 167.2 194 56.2
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 1.2e-39 167.2 191 50.8
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 1.6e-39 166.8 199 50.8
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.1e-39 166.4 193 51.3
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 6.1e-39 164.9 194 53.6
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 1.0e-38 164.1 188 52.1
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 5.2e-38 161.8 195 51.3
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 6.7e-38 161.4 194 52.1
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 8.8e-38 161.0 187 52.9
Sp2g19520 Schrenkiella parvula HOM05D005099 ORTHO05D006087 1.5e-37 160.2 196 55.1
Eucgr.H03959 Eucalyptus grandis HOM05D005099 ORTHO05D006087 2.0e-37 159.8 212 48.6
Nn4g25764 Nelumbo nucifera HOM05D005099 ORTHO05D006087 2.6e-37 159.5 188 54.8
Lj6g0002623 Lotus japonicus HOM05D005099 ORTHO05D006087 5.7e-37 158.3 187 54.0
SGA_v2.0_scaffold67G22601 Striga asiatica HOM05D005099 ORTHO05D006087 2.8e-36 156.0 186 53.2
Lalb_Chr20g0117371 Lupinus albus HOM05D005099 ORTHO05D006087 3.7e-36 155.6 192 54.2
Oeu006417.1 Olea europaea HOM05D005099 ORTHO05D006087 4.8e-36 155.2 188 52.1
Aqoxy2G02900 Aquilegia oxysepala HOM05D005099 ORTHO05D006087 1.4e-35 153.7 198 53.0
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 1.4e-35 153.7 194 47.9
Gorai.005G061600 Gossypium raimondii HOM05D005099 ORTHO05D006087 3.1e-35 152.5 188 51.6
Lsat_1_v5_gn_3_21720 Lactuca sativa HOM05D005099 ORTHO05D006087 3.1e-35 152.5 190 53.7
Gohir.A09G237600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 4.1e-35 152.1 208 51.9
PGR004G0666 Punica granatum HOM05D005099 ORTHO05D006087 5.3e-35 151.8 193 53.9
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 7.0e-35 151.4 195 54.4
Gohir.D02G055600 Gossypium hirsutum HOM05D005099 ORTHO05D006087 7.0e-35 151.4 188 50.5
Hund24882 Selenicereus undatus HOM05D005099 ORTHO05D006087 7.0e-35 151.4 198 51.5
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 9.1e-35 151.0 194 52.6
Gohir.A02G050700 Gossypium hirsutum HOM05D005099 ORTHO05D006087 9.1e-35 151.0 188 51.1
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 1.2e-34 150.6 194 54.1
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 2.0e-34 149.8 188 51.6
AT5G49170 Arabidopsis thaliana HOM05D005099 ORTHO05D006087 2.7e-34 149.4 213 52.1
Gohir.D09G238500 Gossypium hirsutum HOM05D005099 ORTHO05D006087 2.7e-34 149.4 197 53.8
Oeu053996.1 Olea europaea HOM05D005099 ORTHO05D006087 2.7e-34 149.4 187 52.9
BraA06t26768Z Brassica rapa HOM05D005099 ORTHO05D006087 3.5e-34 149.1 204 52.5
Psat1g155760 Pisum sativum HOM05D005099 ORTHO05D006087 7.7e-34 147.9 198 51.0
MD13G1165200 Malus domestica HOM05D005099 ORTHO05D006087 2.9e-33 146.0 192 50.5
BcaNung02585 Brassica carinata HOM05D005099 ORTHO05D006087 6.5e-33 144.8 223 48.9
BolC7t44497H Brassica oleracea HOM05D005099 ORTHO05D006087 6.5e-33 144.8 223 48.9
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 1.1e-32 144.1 187 48.7
BcaC06g30711 Brassica carinata HOM05D005099 ORTHO05D006087 1.9e-32 143.3 227 46.7
CARHR182490 Cardamine hirsuta HOM05D005099 ORTHO05D006087 1.9e-32 143.3 194 48.5
Sc13g0003250 Simmondsia chinensis HOM05D005099 ORTHO05D006087 2.5e-32 142.9 189 50.8
BcaC03g17704 Brassica carinata HOM05D005099 ORTHO05D006087 4.2e-32 142.1 196 53.1
A02p37910 Brassica napus HOM05D005099 ORTHO05D006087 4.2e-32 142.1 196 54.1
C02p57110 Brassica napus HOM05D005099 ORTHO05D006087 4.2e-32 142.1 196 53.1
BolC2t11783H Brassica oleracea HOM05D005099 ORTHO05D006087 4.2e-32 142.1 196 53.1
PSO407G0003 Papaver somniferum HOM05D005099 ORTHO05D006087 5.5e-32 141.7 206 45.6
BraA02t08775Z Brassica rapa HOM05D005099 ORTHO05D006087 9.4e-32 141.0 196 52.6
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 2.1e-31 139.8 188 47.3
Ah.13g074810 Amaranthus hybridus HOM05D005099 ORTHO05D006087 2.7e-31 139.4 182 51.1
AL8G22700 Arabidopsis lyrata HOM05D005099 ORTHO05D006087 2.7e-31 139.4 206 48.1
BcaB07g34138 Brassica carinata HOM05D005099 ORTHO05D006087 6.1e-31 138.3 196 50.5
C07p39730 Brassica napus HOM05D005099 ORTHO05D006087 8.0e-31 137.9 213 48.4
A06p38540 Brassica napus HOM05D005099 ORTHO05D006087 1.0e-30 137.5 227 47.1
Migut.G00130 Erythranthe guttata HOM05D005099 ORTHO05D006087 1.8e-30 136.7 188 48.9
DCAR_002480 Daucus carota HOM05D005099 ORTHO05D006087 3.0e-30 136.0 192 44.8
Gorai.006G261200 Gossypium raimondii HOM05D005099 ORTHO05D006087 8.8e-30 134.4 215 46.0
PSO170G0513 Papaver somniferum HOM05D005099 ORTHO05D006087 8.8e-30 134.4 209 45.5
Sed0015120 Sechium edule HOM05D005099 ORTHO05D006087 4.8e-28 128.6 187 44.9
ECA246G4673 Erigeron canadensis HOM05D005099 ORTHO05D006087 6.3e-28 128.3 201 47.3
Carub.0008s0899 Capsella rubella HOM05D005099 ORTHO05D006087 9.1e-27 124.4 213 46.9
arahy.Tifrunner.gnm1.ann1.H54SCY Arachis hypogaea HOM05D005099 ORTHO05D006087 2.0e-26 123.2 191 46.1
arahy.Tifrunner.gnm1.ann1.L8YWMY Arachis hypogaea HOM05D005099 ORTHO05D006087 1.0e-25 120.9 191 45.5
DCAR_023299 Daucus carota HOM05D005099 ORTHO05D006087 4.0e-22 109.0 189 42.9
SHI00249 Sapria himalayana HOM05D005099 ORTHO05D006087 5.2e-22 108.6 185 41.6
GSVIVG01035110001 Vitis vinifera HOM05D005099 ORTHO05D006087 1.5e-21 107.1 83 71.1
HanXRQChr06g0173741 Helianthus annuus HOM05D005099 ORTHO05D006087 2.6e-21 106.3 188 42.0
Cpa.g.sc50.167 Carica papaya HOM05D005099 ORTHO05D006087 5.7e-21 105.1 127 48.8
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 4.9e-20 102.1 186 39.2
Nitab4.5_0011001g0010 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.6e-18 97.1 186 36.0
Sopen05g032840 Solanum pennellii HOM05D005099 ORTHO05D006087 1.6e-18 97.1 189 38.6
Sc19g0005440 Simmondsia chinensis HOM05D005099 ORTHO05D006087 8.6e-17 91.3 181 36.5
MD13G1165100 Malus domestica HOM05D005099 ORTHO05D006087 4.3e-16 89.0 148 43.2
BcaC06g30713 Brassica carinata HOM05D005099 ORTHO05D006087 2.8e-15 86.3 74 64.9
HPP92_011860 Vanilla planifolia HOM05D005099 ORTHO05D006087 3.6e-15 85.9 176 34.7
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 5.8e-13 78.6 157 43.3
Lalb_Chr15g0086051 Lupinus albus HOM05D005099 ORTHO05D006087 9.8e-13 77.8 92 51.1
Lj6P680T81 Lonicera japonica HOM05D005099 ORTHO05D006087 3.7e-12 75.9 64 57.8
Nn7g36563 Nelumbo nucifera HOM05D005099 ORTHO05D006087 4.9e-12 75.5 92 47.8
Nitab4.5_0001097g0130 Nicotiana tabacum HOM05D005099 ORTHO05D006087 5.4e-11 72.0 162 32.7
Oeu035687.1 Olea europaea HOM05D005099 ORTHO05D006087 2.7e-10 69.7 200 33.0
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 7.8e-10 68.2 183 29.5
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 3.0e-09 66.2 187 28.3
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 1.9e-08 63.5 189 31.2
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 4.3e-08 62.4 174 31.0
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 9.5e-08 61.2 187 26.2
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.6e-07 60.5 174 28.2
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 2.8e-07 59.7 178 29.8
Actinidia00002 Actinidia chinensis HOM05D005099 ORTHO05D006087 4.7e-07 58.9 38 65.8
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 4.7e-07 58.9 189 27.0
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 1.1e-06 57.8 188 26.6
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 1.8e-06 57.0 189 30.7
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 2.3e-06 56.6 195 29.7
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 3.1e-06 56.2 164 32.3
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 4.0e-06 55.8 186 28.5
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 4.0e-06 55.8 184 25.5
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 5.2e-06 55.5 178 28.7


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