Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.1e-36 156.0 73 100.0
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 97.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 97.3
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 97.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.5e-36 154.8 73 97.3
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 97.3
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 97.3
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 97.3
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 97.3
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 97.3
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 5.5e-36 153.7 73 95.9
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-35 152.1 73 97.3
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 6.1e-35 150.2 73 94.5
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 6.1e-35 150.2 73 95.9
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.2e-33 146.0 73 94.5
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.7e-32 141.0 73 87.7
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.6e-30 135.6 72 86.1
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.7e-30 134.8 72 86.1
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 3.5e-30 134.4 72 84.7
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.9e-30 133.7 71 85.9
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 5.9e-30 133.7 71 84.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.8e-29 131.0 73 79.5
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 3.8e-29 131.0 71 84.5
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.2e-28 127.9 72 79.2
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 4.2e-28 127.5 70 85.7
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 5.5e-28 127.1 71 78.9
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 79.2
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 76.4
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 75.0
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 75.0
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 7.2e-28 126.7 72 75.0
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 9.4e-28 126.3 72 76.4
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.6e-27 125.6 72 73.6
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.6e-27 125.6 72 73.6
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 77.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 79.2
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 79.2
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-27 125.2 72 77.8
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.7e-27 124.8 71 78.9
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 2.7e-27 124.8 73 75.3
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 2.7e-27 124.8 72 77.8
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.6e-27 124.4 72 73.6
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.6e-27 124.4 73 76.7
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 3.6e-27 124.4 71 76.1
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 6.1e-27 123.6 71 74.6
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 6.1e-27 123.6 72 73.6
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 6.1e-27 123.6 72 75.0
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 8.0e-27 123.2 70 81.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 8.0e-27 123.2 72 79.2
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 8.0e-27 123.2 72 75.0
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 82.6
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 1.4e-26 122.5 72 73.6
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 78.3
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.4e-26 122.5 72 75.0
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 84.8
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 84.8
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.8e-26 122.1 66 84.8
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 73.6
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.8e-26 122.1 72 75.0
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.0e-26 121.3 72 76.4
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 3.0e-26 121.3 72 75.0
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 4.0e-26 120.9 71 77.5
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 4.0e-26 120.9 72 73.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 4.0e-26 120.9 72 73.6
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 6.8e-26 120.2 72 73.6
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 6.8e-26 120.2 71 74.6
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 8.8e-26 119.8 72 75.0
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 71 71.8
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 79.7
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.2e-25 119.4 72 72.2
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 72.2
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.5e-25 119.0 71 76.1
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.5e-25 119.0 72 70.8
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.0e-25 118.6 69 76.8
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 70.8
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 2.0e-25 118.6 71 73.2
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.6e-25 118.2 71 70.4
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 2.6e-25 118.2 72 73.6
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 3.4e-25 117.9 72 70.8
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.4e-25 117.9 72 72.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 3.4e-25 117.9 72 72.2
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 4.4e-25 117.5 72 69.4
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.5e-25 116.7 72 69.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 7.5e-25 116.7 72 72.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 9.8e-25 116.3 66 81.8
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.7e-24 115.5 73 69.9
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 71.8
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 73.9
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 73.9
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.1e-23 112.8 72 66.7
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-23 112.1 62 79.0
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 1.2e-22 109.4 58 81.0
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-22 109.4 72 65.3
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 66.7
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.5e-22 107.8 61 73.8
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.9e-22 107.1 65 67.7
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.9e-22 107.1 65 67.7
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.3e-21 105.1 72 65.3
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.3e-21 105.1 72 62.5
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.3e-21 105.1 72 62.5
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.0e-21 104.0 61 75.4
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.0e-21 104.0 72 63.9
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 6.6e-21 103.6 72 63.9
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 6.6e-21 103.6 72 63.9
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.5e-20 102.4 72 65.3
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-20 102.4 72 62.5
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.9e-20 102.1 72 63.9
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 2.5e-20 101.7 64 73.4
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.3e-20 101.3 72 61.1
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.3e-20 101.3 72 59.7
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.6e-19 99.0 72 61.1
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 4.7e-19 97.4 69 58.0
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.8e-18 95.5 69 56.5
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.5e-17 92.4 70 54.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.4e-17 91.3 49 81.6
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 5.7e-17 90.5 61 65.6
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-15 86.3 48 79.2
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.7e-14 81.6 58 63.8
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 8.3e-08 60.1 70 42.9
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.0e-06 55.5 71 38.0
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.0e-06 55.5 69 43.5
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.7e-06 55.1 70 35.7


User provided reference genes

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