Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g30790 Schrenkiella parvula HOM05D008834 ORTHO05D011314 3.8e-108 394.8 197 100.0
BcaC04g23732 Brassica carinata HOM05D008834 ORTHO05D011314 3.3e-59 232.3 193 63.2
C09p05270 Brassica napus HOM05D008834 ORTHO05D011314 3.3e-59 232.3 193 63.2
BcaB04g19619 Brassica carinata HOM05D008834 ORTHO05D011314 2.1e-58 229.6 201 61.2
BolC9t53454H Brassica oleracea HOM05D008834 ORTHO05D011314 3.6e-58 228.8 193 62.7
CARHR078500 Cardamine hirsuta HOM05D008834 ORTHO05D011314 4.0e-57 225.3 188 61.2
A09p04880 Brassica napus HOM05D008834 ORTHO05D011314 1.5e-56 223.4 193 61.1
AL3G14310 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 1.3e-55 220.3 192 59.9
BraA09t36125Z Brassica rapa HOM05D008834 ORTHO05D011314 2.4e-54 216.1 201 58.7
Thhalv10027937m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 2.4e-54 216.1 180 61.7
AT3G04320 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 1.2e-53 213.8 192 57.8
Carub.0003s0353 Capsella rubella HOM05D008834 ORTHO05D011314 1.3e-52 210.3 194 58.8
AT3G04330 Arabidopsis thaliana HOM05D008834 ORTHO05D011314 1.8e-49 199.9 193 57.0
AL3G14320 Arabidopsis lyrata HOM05D008834 ORTHO05D011314 7.6e-48 194.5 192 55.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 4.2e-38 162.2 193 46.1
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 7.1e-38 161.4 193 46.1
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 7.1e-38 161.4 193 46.1
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.1e-37 159.8 193 45.1
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 4.6e-37 158.7 197 45.7
BcaB04g19618 Brassica carinata HOM05D008834 ORTHO05D011314 7.4e-35 151.4 191 45.5
Thhalv10023952m.g Eutrema salsugineum HOM05D008834 ORTHO05D011314 2.2e-34 149.8 119 65.5
A09p14850 Brassica napus HOM05D008834 ORTHO05D011314 6.9e-25 118.2 168 45.2
BcaC04g22551 Brassica carinata HOM05D008834 ORTHO05D011314 4.5e-24 115.5 168 45.8
C09p17980 Brassica napus HOM05D008834 ORTHO05D011314 7.7e-24 114.8 168 45.8
BolC9t54694H Brassica oleracea HOM05D008834 ORTHO05D011314 1.0e-23 114.4 168 45.8
BraA09t37131Z Brassica rapa HOM05D008834 ORTHO05D011314 1.0e-23 114.4 168 44.6
BcaC08g46552 Brassica carinata HOM05D008834 ORTHO05D011314 8.8e-20 101.3 172 39.0
A01p21740 Brassica napus HOM05D008834 ORTHO05D011314 2.6e-19 99.8 168 36.9
BraA01t02083Z Brassica rapa HOM05D008834 ORTHO05D011314 2.6e-19 99.8 168 36.9
BraA07t31310Z Brassica rapa HOM05D008834 ORTHO05D011314 4.4e-19 99.0 164 40.9
BolC9t54594H Brassica oleracea HOM05D008834 ORTHO05D011314 1.2e-16 90.9 169 41.4
C09p17130 Brassica napus HOM05D008834 ORTHO05D011314 4.5e-16 89.0 163 41.1
BolC1t02656H Brassica oleracea HOM05D008834 ORTHO05D011314 1.0e-15 87.8 166 35.5
BcaC04g22636 Brassica carinata HOM05D008834 ORTHO05D011314 6.5e-15 85.1 156 38.5
Thhalv10010972m.g Eutrema salsugineum HOM05D020464 ORTHO05D023357 4.2e-14 82.4 173 32.4
A08p31540 Brassica napus HOM05D008834 ORTHO05D040119 2.7e-13 79.7 160 34.4
BraA08t35076Z Brassica rapa HOM05D008834 ORTHO05D040119 2.7e-13 79.7 160 34.4
BcaC09g50271 Brassica carinata HOM05D008834 ORTHO05D011314 6.1e-13 78.6 174 32.8
BcaC08g46549 Brassica carinata HOM05D008834 ORTHO05D011314 2.3e-12 76.6 130 39.2
Aa31LG4G8060 Aethionema arabicum HOM05D020464 ORTHO05D023357 3.0e-12 76.3 163 36.2
A05p21740 Brassica napus HOM05D008834 ORTHO05D011314 6.7e-12 75.1 170 37.6
BraA05t21095Z Brassica rapa HOM05D008834 ORTHO05D011314 6.7e-12 75.1 170 37.6
Aa31sc179G50 Aethionema arabicum HOM05D020464 ORTHO05D023357 1.5e-11 73.9 160 35.6
C06p45230 Brassica napus HOM05D008834 ORTHO05D011314 1.1e-09 67.8 77 42.9


User provided reference genes

Program Settings