Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g30780 Schrenkiella parvula HOM05D009123 ORTHO05D019748 1.5e-86 322.8 160 100.0
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 1.7e-53 213.0 157 66.9
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 2.6e-14 82.8 164 36.0
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 2.7e-11 72.8 158 33.5
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 7.9e-11 71.2 167 32.9
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 1.8e-10 70.1 162 33.3
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 8.7e-10 67.8 161 32.3
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 8.7e-10 67.8 149 34.2
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 1.5e-09 67.0 172 34.9
BolC3t14436H Brassica oleracea HOM05D025788 ORTHO05D019748 7.4e-09 64.7 106 37.7
BolC3t14467H Brassica oleracea HOM05D025788 ORTHO05D019748 7.4e-09 64.7 106 37.7
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 1.6e-08 63.5 163 35.0
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 2.2e-08 63.2 47 63.8
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 8.2e-08 61.2 155 35.5
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 1.1e-07 60.8 151 28.5
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 2.4e-07 59.7 155 35.5
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 3.1e-07 59.3 155 34.2
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 3.1e-07 59.3 155 34.2
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 1.2e-06 57.4 157 31.2
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 2.0e-06 56.6 93 36.6
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 2.0e-06 56.6 93 36.6
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 2.6e-06 56.2 163 30.1
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 3.4e-06 55.8 157 29.9
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 5.9e-06 55.1 171 30.4


User provided reference genes

Program Settings