Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 9.3e-43 176.4 85 100.0
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 6.0e-26 120.6 105 62.9
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 5.1e-25 117.5 100 66.0
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 9.6e-24 113.2 100 65.0
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 1.3e-23 112.8 101 62.4
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 2.8e-23 111.7 100 63.0
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 2.8e-23 111.7 100 63.0
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 2.8e-23 111.7 100 63.0
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 3.7e-23 111.3 101 61.4
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 8.2e-23 110.2 111 59.5
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 1.1e-22 109.8 102 60.8
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 3.1e-22 108.2 109 58.7
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 4.0e-22 107.8 98 64.3
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 6.9e-22 107.1 97 61.9
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 4.5e-21 104.4 97 60.8
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 5.8e-21 104.0 109 57.8
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 1.3e-20 102.8 91 62.6
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 6.7e-09 63.9 65 52.3
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 8.2e-07 57.0 79 39.2
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 1.1e-06 56.6 79 39.2
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 1.1e-06 56.6 112 34.8
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 4.1e-06 54.7 93 38.7
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 5.3e-06 54.3 59 47.5


User provided reference genes

Program Settings