Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g29400 Schrenkiella parvula HOM05D008251 ORTHO05D010450 2.9e-29 131.3 71 100.0
BcaC06g34809 Brassica carinata HOM05D008251 ORTHO05D010450 5.6e-25 117.1 69 89.9
C07p24410 Brassica napus HOM05D008251 ORTHO05D010450 5.6e-25 117.1 69 89.9
A07p16690 Brassica napus HOM05D008251 ORTHO05D010450 7.3e-25 116.7 69 89.9
BraA07t29392Z Brassica rapa HOM05D001855 ORTHO05D002493 7.3e-25 116.7 69 89.9
AL8G44070 Arabidopsis lyrata HOM05D008251 ORTHO05D010450 1.3e-21 105.9 69 81.2
Thhalv10005599m.g Eutrema salsugineum HOM05D008251 ORTHO05D010450 1.1e-20 102.8 72 79.2
AT5G67265 Arabidopsis thaliana HOM05D008251 ORTHO05D010450 2.4e-20 101.7 70 78.6
Carub.0008s2724 Capsella rubella HOM05D008251 ORTHO05D010450 6.0e-19 97.1 68 77.9
CARHR280360 Cardamine hirsuta HOM05D008251 ORTHO05D010450 6.0e-19 97.1 69 76.8
BcaB02g09949 Brassica carinata HOM05D008251 ORTHO05D010450 4.4e-14 80.9 70 68.6
THA.LOC104819244 Tarenaya hassleriana HOM05D008251 ORTHO05D010450 3.7e-13 77.8 65 67.7
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 6.4e-13 77.0 54 70.4
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 1.1e-12 76.3 54 68.5
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 9.2e-12 73.2 56 66.1
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.1e-11 72.0 69 58.0
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.1e-11 72.0 69 58.0
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.1e-11 72.0 69 58.0
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 2.7e-11 71.6 60 66.7
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 3.5e-11 71.2 69 58.0
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 4.6e-11 70.9 54 63.0
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 1.0e-10 69.7 69 56.5
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 1.3e-10 69.3 55 65.5
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 5.1e-10 67.4 64 54.7
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 1.1e-09 66.2 71 53.5
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 4.3e-09 64.3 55 61.8
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 4.3e-09 64.3 61 55.7
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 7.3e-09 63.5 72 51.4
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 2.1e-08 62.0 71 52.1
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 2.8e-08 61.6 56 58.9
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 4.7e-08 60.8 60 53.3
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 1.1e-07 59.7 76 50.0
TWI73G1017 Tripterygium wilfordii HOM05D008251 ORTHO05D010450 3.1e-07 58.2 62 51.6
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 5.2e-07 57.4 65 52.3
Dinv26862 Davidia involucrata HOM05D008251 ORTHO05D010450 5.2e-07 57.4 53 54.7
CAN.G370.14 Capsicum annuum HOM05D008251 ORTHO05D010450 6.8e-07 57.0 61 50.8
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 8.9e-07 56.6 69 47.8
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 8.9e-07 56.6 57 56.1
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.2e-06 56.2 59 55.9
QL05p026832 Quercus lobata HOM05D008251 ORTHO05D010450 1.5e-06 55.8 59 49.2
Lalb_Chr09g0333891 Lupinus albus HOM05D008251 ORTHO05D010450 3.4e-06 54.7 63 49.2
Manes.13G118700 Manihot esculenta HOM05D008251 ORTHO05D010450 4.4e-06 54.3 53 54.7
PGSC0003DMG400024956 Solanum tuberosum HOM05D008251 ORTHO05D010450 4.4e-06 54.3 69 46.4
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 7.6e-06 53.5 59 54.2
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 7.6e-06 53.5 59 54.2


User provided reference genes

Program Settings