Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 4.8e-216 754.2 382 100.0
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 9.8e-193 676.8 381 90.0
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.1e-191 673.3 379 90.2
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.1e-191 673.3 379 90.2
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 5.4e-191 671.0 378 90.2
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.6e-190 669.5 377 90.2
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.0e-189 666.8 371 90.8
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.9e-188 662.5 379 88.1
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 7.3e-188 660.6 404 84.7
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 2.8e-187 658.7 382 88.2
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 3.6e-187 658.3 378 87.8
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.7e-184 649.4 377 88.6
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-169 600.1 370 81.4
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 4.3e-164 581.6 371 77.9
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 2.1e-163 579.3 376 75.8
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 6.2e-163 577.8 377 76.1
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 5.3e-162 574.7 377 76.1
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.2e-161 573.5 374 76.2
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 1.5e-161 573.2 383 74.4
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 4.4e-161 571.6 375 76.0
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.3e-157 560.1 375 76.0
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 3.3e-156 555.4 370 74.3
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.6e-155 553.1 374 74.1
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 3.6e-155 552.0 366 74.9
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 8.1e-155 550.8 373 73.2
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 8.1e-155 550.8 365 75.3
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.4e-154 549.3 387 72.6
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 2.6e-153 545.8 368 73.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.4e-153 545.4 374 73.0
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 9.9e-153 543.9 371 71.7
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.3e-152 543.5 370 73.0
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.3e-152 543.5 363 72.7
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 1.7e-152 543.1 375 72.8
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.2e-152 542.7 377 71.6
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 2.2e-152 542.7 375 71.5
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.9e-152 542.3 374 73.0
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 6.4e-152 541.2 374 72.7
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 8.4e-152 540.8 375 72.3
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.4e-151 540.0 376 72.1
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 5.4e-151 538.1 362 74.6
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 5.4e-151 538.1 370 72.7
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 9.3e-151 537.3 381 71.4
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 9.3e-151 537.3 376 71.0
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 9.3e-151 537.3 382 69.9
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 1.2e-150 537.0 389 70.7
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.6e-150 536.6 378 72.2
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 2.1e-150 536.2 376 70.5
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 4.6e-150 535.0 380 71.8
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 6.0e-150 534.6 363 72.5
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 1.0e-149 533.9 369 70.7
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 2.3e-149 532.7 372 72.6
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.3e-149 532.7 366 71.0
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 3.0e-149 532.3 373 70.5
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 3.0e-149 532.3 366 71.0
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 3.9e-149 531.9 388 69.1
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.9e-149 531.9 377 71.6
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 3.9e-149 531.9 373 71.6
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 1.5e-148 530.0 374 72.2
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.9e-148 529.6 372 70.7
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.5e-148 529.3 380 69.2
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.3e-147 526.9 370 70.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 1.6e-147 526.6 370 71.1
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.6e-147 526.6 369 70.7
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 2.8e-147 525.8 367 70.3
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 3.7e-147 525.4 370 71.1
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 1.4e-146 523.5 440 62.3
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.4e-146 523.5 368 70.1
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.5e-145 520.0 379 68.3
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 2.6e-145 519.2 367 71.7
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 3.4e-145 518.8 374 68.7
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 1.0e-144 517.3 374 69.5
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.7e-144 516.5 368 69.3
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 2.9e-144 515.8 374 70.6
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 3.8e-144 515.4 371 68.2
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.2e-143 512.3 361 70.6
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 3.2e-143 512.3 365 71.8
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.6e-142 510.0 383 66.6
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.0e-141 507.3 356 71.9
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 1.0e-141 507.3 360 69.7
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.9e-140 503.1 357 71.4
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.6e-139 500.0 379 67.8
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 2.4e-138 496.1 369 69.1
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 5.3e-138 495.0 372 66.4
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 6.9e-138 494.6 376 65.7
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.0e-137 493.0 346 70.8
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.8e-136 488.8 365 68.8
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.8e-136 488.8 365 68.8
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 8.4e-136 487.6 374 68.2
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.1e-135 487.3 374 68.4
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.1e-135 484.6 367 68.1
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 3.3e-132 475.7 371 63.9
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.4e-130 470.3 365 67.7
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 2.9e-128 462.6 379 62.5
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.2e-126 457.2 376 61.7
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 2.1e-126 456.4 371 63.3
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 6.9e-122 441.4 363 61.7
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 3.8e-120 435.6 394 59.4
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.1e-119 434.1 366 62.8
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 3.9e-117 425.6 366 60.1
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 2.0e-116 423.3 380 59.5
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 3.7e-115 419.1 380 60.0
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 6.3e-115 418.3 356 62.4
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 8.2e-115 417.9 383 57.4
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 8.2e-115 417.9 372 57.8
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 8.5e-112 407.9 374 59.4
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 2.7e-110 402.9 377 56.0
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.8e-109 400.2 381 56.4
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.5e-108 397.1 372 54.8
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.1e-106 387.9 226 83.2
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.7e-102 375.6 375 52.8
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.5e-95 353.2 317 60.6
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 6.8e-93 345.1 242 72.7
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 6.3e-91 338.6 366 51.1
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 1.0e-88 331.3 272 62.1
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 9.5e-87 324.7 314 55.1
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 2.9e-75 286.6 395 43.8
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.9e-72 276.2 172 75.0
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.9e-72 276.2 172 75.0
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 6.0e-65 252.3 393 42.0
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.8e-53 214.2 166 62.0
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 4.0e-53 213.0 403 37.5
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.8e-46 190.3 130 76.2
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 4.9e-43 179.5 147 60.5
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 7.1e-42 175.6 140 70.7
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-41 174.9 111 82.9
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.1e-39 168.3 405 33.8
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 1.1e-29 135.2 83 75.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 1.3e-27 128.3 389 31.9
BcaC07g37383 Brassica carinata HOM05D005694 ORTHO05D031998 9.7e-15 85.5 108 51.9
BolC8t47687H Brassica oleracea HOM05D005694 ORTHO05D031998 9.7e-15 85.5 108 51.9
BolC8t47689H Brassica oleracea HOM05D005694 ORTHO05D031998 9.7e-15 85.5 108 51.9
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-14 85.1 73 60.3
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-14 85.1 73 60.3
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.5e-12 78.2 72 61.1
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 2.1e-09 67.8 98 43.9
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 2.8e-06 57.4 310 24.2


User provided reference genes

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