Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 9.4e-102 373.6 201 100.0
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 1.8e-89 332.8 197 90.4
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 1.3e-87 326.6 197 88.8
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 1.3e-87 326.6 197 88.8
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 1.3e-87 326.6 196 88.8
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 8.5e-87 323.9 195 88.2
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.1e-86 323.6 197 87.8
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 7.2e-86 320.9 195 87.2
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.6e-85 319.7 197 86.8
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 2.1e-85 319.3 193 88.6
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 2.7e-85 318.9 197 86.8
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 8.0e-85 317.4 197 87.3
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 3.8e-63 245.4 202 67.3
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.9e-46 189.9 202 54.0
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 2.5e-46 189.5 194 54.6
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 3.3e-46 189.1 198 54.0
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 4.3e-46 188.7 195 54.9
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 3.6e-45 185.7 196 53.1
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.4e-44 183.7 195 52.8
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.4e-44 183.7 199 53.8
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 1.4e-44 183.7 194 53.1
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 5.2e-44 181.8 194 53.6
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 6.8e-44 181.4 198 52.5
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 6.8e-44 181.4 193 52.8
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 2.6e-43 179.5 194 53.1
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.4e-43 179.1 194 53.1
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 3.5e-40 169.1 196 50.5
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 7.8e-40 167.9 194 51.0
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.7e-39 166.8 192 50.0
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.9e-39 165.6 194 51.5
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 2.1e-37 159.8 194 50.0
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 4.7e-37 158.7 194 47.4
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 8.1e-37 157.9 194 50.0
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 8.1e-37 157.9 197 49.7
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.1e-36 157.5 196 48.5
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.4e-36 157.1 194 46.9
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.3e-36 156.4 194 49.5
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 3.1e-36 156.0 194 49.0
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 4.0e-36 155.6 194 49.5
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 1.2e-35 154.1 196 48.0
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.2e-35 154.1 197 48.7
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 1.5e-35 153.7 192 46.9
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 3.4e-35 152.5 197 48.2
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 5.8e-35 151.8 199 47.7
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.7e-34 150.2 194 47.4
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.7e-34 150.2 194 45.4
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 2.2e-34 149.8 196 44.4
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.7e-34 149.1 196 46.9
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 1.4e-33 147.1 194 47.4
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 1.9e-33 146.7 196 45.9
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 2.4e-33 146.4 188 46.8
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 2.4e-33 146.4 194 46.4
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 5.4e-33 145.2 196 45.4
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 5.4e-33 145.2 197 44.2
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 9.2e-33 144.4 196 43.4
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 9.2e-33 144.4 191 45.5
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.2e-32 144.1 196 46.9
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 1.2e-32 144.1 197 47.2
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 2.1e-32 143.3 194 44.8
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 4.6e-32 142.1 197 45.7
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 4.6e-32 142.1 194 45.4
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.0e-31 141.0 195 44.1
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 1.0e-31 141.0 194 43.3
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 1.7e-31 140.2 194 43.8
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.3e-31 139.8 198 44.4
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 3.0e-31 139.4 194 43.3
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 3.9e-31 139.0 194 43.8
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 5.1e-31 138.7 198 44.9
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 6.6e-31 138.3 197 45.7
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 8.6e-31 137.9 194 44.3
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 8.6e-31 137.9 198 44.9
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.1e-30 137.5 197 45.7
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 1.1e-30 137.5 195 44.1
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.5e-30 137.1 197 45.7
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.5e-30 137.1 194 43.8
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.9e-30 136.7 197 45.7
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 2.5e-30 136.3 198 43.9
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 3.3e-30 136.0 196 43.9
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 3.3e-30 136.0 191 44.5
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 3.3e-30 136.0 193 44.0
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 4.3e-30 135.6 193 48.2
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 7.3e-30 134.8 198 43.9
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 2.1e-29 133.3 190 47.4
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.1e-29 133.3 197 45.2
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 2.8e-29 132.9 195 42.1
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 6.2e-29 131.7 190 47.4
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 6.2e-29 131.7 185 43.2
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.1e-28 131.0 195 42.6
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 3.1e-28 129.4 194 41.8
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 4.0e-28 129.0 198 44.4
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 6.8e-28 128.3 195 43.6
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.2e-27 127.5 190 43.2
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.4e-27 125.9 196 42.9
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 4.4e-27 125.6 192 41.7
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 5.8e-27 125.2 196 40.8
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 5.8e-27 125.2 195 45.6
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.3e-26 124.0 188 44.7
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.3e-26 124.0 203 41.4
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.4e-25 120.6 198 40.9
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 2.4e-25 119.8 196 41.3
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 4.2e-25 119.0 159 48.4
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 4.2e-25 119.0 195 39.0
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 5.4e-25 118.6 196 41.8
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 9.2e-25 117.9 196 39.3
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 9.2e-25 117.9 198 39.4
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 9.2e-25 117.9 195 44.1
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 1.2e-24 117.5 194 42.8
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.6e-24 117.1 189 45.0
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 1.6e-24 117.1 185 42.2
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 6.0e-24 115.2 203 38.4
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 6.0e-24 115.2 192 39.6
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 1.0e-23 114.4 194 38.1
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.3e-23 114.0 194 38.1
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.3e-23 114.0 196 38.8
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.7e-23 113.6 195 42.6
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 2.3e-23 113.2 192 39.6
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 2.3e-23 113.2 188 42.6
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 8.7e-23 111.3 194 39.2
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 8.7e-23 111.3 150 46.7
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 8.7e-23 111.3 198 42.4
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 1.9e-22 110.2 190 41.1
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 3.3e-22 109.4 196 39.8
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.3e-22 109.4 184 41.8
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 4.3e-22 109.0 138 45.7
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 7.3e-22 108.2 196 38.3
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 7.3e-22 108.2 200 38.5
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.6e-21 107.1 191 36.1
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 1.6e-21 107.1 196 38.3
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 2.8e-21 106.3 193 36.8
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 4.7e-21 105.5 196 37.2
BolC6t39019H Brassica oleracea HOM05D004648 ORTHO05D031748 6.2e-21 105.1 66 89.4
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 1.1e-20 104.4 163 41.7
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 3.1e-20 102.8 128 51.6
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 5.3e-20 102.1 191 36.6
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 5.3e-20 102.1 192 37.0
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 3.4e-19 99.4 114 50.9
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 7.6e-19 98.2 196 38.3
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 9.9e-19 97.8 203 36.9
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.3e-18 97.4 202 37.1
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 2.9e-18 96.3 196 34.2
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.1e-17 94.4 196 34.7
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.9e-17 93.6 185 36.2
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 3.2e-17 92.8 158 39.9
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 9.3e-17 91.3 175 35.4
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 2.1e-16 90.1 205 37.1
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 2.7e-16 89.7 175 35.4
C06p39250 Brassica napus HOM05D004648 ORTHO05D005782 3.6e-13 79.3 50 90.0
C05p30630 Brassica napus HOM05D004648 ORTHO05D031748 4.8e-13 79.0 50 88.0
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 6.2e-13 78.6 135 36.3
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.1e-12 77.8 137 35.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 2.4e-12 76.6 116 40.5
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 6.9e-12 75.1 198 30.3
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.4e-11 72.8 199 30.2
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 3.4e-11 72.8 100 44.0


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