Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 3.6e-43 177.9 95 100.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 1.2e-38 162.9 95 91.6
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 9.4e-36 153.3 96 91.7
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.0e-34 149.8 96 87.5
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.0e-34 149.8 96 86.5
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.0e-34 149.8 96 86.5
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 6.7e-34 147.1 96 85.4
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 7.4e-33 143.7 94 86.2
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 3.1e-31 138.3 90 84.4
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 2.2e-29 132.1 95 76.8
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.2e-25 119.8 95 68.4
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.3e-24 116.3 96 68.8
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 4.8e-24 114.4 97 68.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.1e-23 111.7 95 64.2
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 5.9e-22 107.5 91 64.8
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.9e-22 107.5 92 65.2
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 1.3e-21 106.3 94 68.1
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 3.8e-21 104.8 96 62.5
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 5.0e-21 104.4 96 62.5
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 8.5e-21 103.6 95 61.1
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 1.5e-20 102.8 98 62.2
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.5e-20 102.8 71 73.2
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.9e-20 102.4 92 63.0
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 5.5e-20 100.9 93 63.4
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 9.4e-20 100.1 95 60.0
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-19 99.8 89 62.9
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-19 99.8 89 62.9
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.6e-19 99.4 95 61.1
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.1e-19 99.0 92 63.0
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.7e-19 98.6 96 61.5
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.7e-19 98.6 96 61.5
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 4.7e-19 97.8 95 60.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.7e-19 97.8 89 60.7
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 6.1e-19 97.4 97 60.8
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.0e-19 97.1 92 59.8
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.0e-19 97.1 92 59.8
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.0e-18 96.7 96 60.4
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.4e-18 96.3 89 59.6
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.4e-18 96.3 89 59.6
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.6e-17 92.0 89 53.9
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.6e-17 92.0 90 56.7
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 5.7e-17 90.9 99 54.5
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 7.5e-17 90.5 97 53.6
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 9.8e-17 90.1 93 60.2
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.3e-16 89.7 89 51.7
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 2.2e-16 89.0 92 54.3
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.8e-16 88.6 91 57.1
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 4.8e-16 87.8 87 58.6
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 4.8e-16 87.8 73 63.0
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.1e-15 86.7 66 71.2
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.1e-15 86.7 97 53.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.1e-15 86.7 99 52.5
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.4e-15 86.3 99 52.5
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.8e-15 85.9 89 57.3
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.8e-15 85.9 89 57.3
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 3.1e-15 85.1 92 54.3
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.1e-15 84.7 86 58.1
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 4.1e-15 84.7 92 54.3
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 4.1e-15 84.7 89 57.3
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.6e-14 82.8 63 73.0
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 2.0e-14 82.4 84 53.6
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 5.9e-14 80.9 97 49.5
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 5.9e-14 80.9 91 52.7
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 5.9e-14 80.9 64 67.2
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 1.0e-13 80.1 97 50.5
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.0e-13 80.1 100 49.0
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 8.6e-13 77.0 74 56.8
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.5e-12 76.3 89 51.7
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.9e-12 75.9 84 58.3
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.9e-12 75.9 90 46.7
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 2.5e-12 75.5 86 52.3
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.2e-11 73.2 90 43.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.8e-11 72.0 82 54.9
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 8.0e-11 70.5 104 44.2
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.4e-07 59.7 50 64.0


User provided reference genes

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