Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.9e-226 788.9 403 100.0
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 7.7e-156 554.3 354 79.4
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 9.8e-135 484.2 398 63.8
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 9.8e-135 484.2 398 63.8
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 9.8e-135 484.2 398 63.8
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 3.2e-133 479.2 398 63.6
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 3.2e-133 479.2 398 63.6
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 3.5e-132 475.7 371 66.0
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.2e-102 376.7 387 56.6
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 7.1e-101 371.7 406 53.0
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 2.8e-97 359.8 402 53.0
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 6.2e-97 358.6 377 53.8
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 9.0e-96 354.8 387 53.7
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 9.0e-96 354.8 387 53.7
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 5.8e-95 352.1 387 52.5
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-94 350.5 387 53.0
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.9e-94 349.7 378 53.7
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.9e-94 349.7 378 53.7
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-93 347.4 387 52.5
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 9.3e-93 344.7 377 53.3
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-92 344.0 388 52.6
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 1.3e-91 340.9 395 51.6
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 2.3e-91 340.1 396 51.3
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.5e-90 337.4 374 51.6
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 2.1e-68 263.8 377 45.4
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 3.7e-65 253.1 279 52.7
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 3.7e-65 253.1 279 52.7
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-46 190.3 180 55.6
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 2.9e-46 190.3 180 55.6
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.0e-43 180.3 361 31.6
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 7.8e-39 165.6 159 55.3
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.6e-29 132.9 208 39.4
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 5.6e-29 132.9 208 39.4
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 2.8e-28 130.6 193 42.0
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 2.8e-28 130.6 165 45.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 4.7e-28 129.8 179 41.3
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 4.7e-28 129.8 179 41.3
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 2.3e-27 127.5 191 43.5
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 5.2e-27 126.3 197 40.1
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.2e-26 125.2 188 42.6
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 2.0e-26 124.4 203 39.9
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 7.5e-26 122.5 193 38.9
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 1.3e-25 121.7 193 37.8
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 4.9e-25 119.8 201 40.3
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 6.4e-25 119.4 191 38.2
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 6.4e-25 119.4 153 39.2
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.9e-24 117.9 207 37.2
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 2.4e-24 117.5 191 38.2
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 2.4e-24 117.5 201 36.8
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 7.0e-24 115.9 191 38.2
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 9.2e-24 115.5 201 37.8
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 7.8e-23 112.5 211 35.1
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.3e-22 111.7 166 39.8
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 1.7e-22 111.3 156 38.5
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.7e-22 111.3 197 39.6
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 3.9e-22 110.2 157 38.9
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 5.0e-22 109.8 157 40.1
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 5.0e-22 109.8 157 38.9
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 6.6e-22 109.4 193 35.2
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 8.6e-22 109.0 193 36.3
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 1.1e-21 108.6 193 35.2
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 2.5e-21 107.5 157 40.1
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 2.5e-21 107.5 157 40.1
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 2.5e-21 107.5 157 39.5
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.3e-21 106.7 155 36.1
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 9.5e-21 105.5 156 38.5
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.6e-20 104.8 170 31.8
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.8e-20 104.0 191 38.7
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 8.1e-20 102.4 191 36.6
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 8.1e-20 102.4 190 34.2
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 8.1e-20 102.4 190 34.2
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 8.1e-20 102.4 191 36.6
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-19 102.1 239 31.8
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.4e-19 101.7 359 27.0
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 5.2e-19 99.8 191 37.2
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 5.2e-19 99.8 191 37.2
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 5.2e-19 99.8 191 37.2
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 6.8e-19 99.4 168 37.5
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.2e-18 98.6 165 37.0
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 1.5e-18 98.2 208 36.5
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 7.5e-18 95.9 164 38.4
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 6.4e-17 92.8 205 35.1
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.4e-16 91.7 166 35.5
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 1.9e-16 91.3 205 34.6
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 2.4e-16 90.9 79 58.2
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 3.2e-16 90.5 171 35.1
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 4.1e-16 90.1 204 31.4
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 4.1e-16 90.1 174 34.5
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.1e-15 87.8 124 39.5
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.1e-15 87.8 164 34.8
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.1e-15 87.8 164 34.8
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 3.5e-15 87.0 164 34.1
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 4.6e-15 86.7 198 31.3
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 4.6e-15 86.7 190 30.5
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-13 82.0 198 30.3
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 3.3e-13 80.5 188 29.8
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 8.9e-11 72.4 165 32.1
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 4.4e-10 70.1 134 34.3
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 6.4e-09 66.2 134 38.1
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.1e-08 65.5 98 39.8
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 4.1e-08 63.5 179 29.6
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 4.1e-08 63.5 179 29.6
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 4.1e-08 63.5 165 31.5
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 1.6e-07 61.6 120 35.8
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 3.5e-07 60.5 170 28.8
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 1.0e-06 58.9 171 26.9
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 1.0e-06 58.9 171 26.9
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 1.3e-06 58.5 171 26.9
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 1.3e-06 58.5 174 28.2
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 1.3e-06 58.5 171 26.9
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 1.7e-06 58.2 157 30.6
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 2.3e-06 57.8 163 29.4
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 3.0e-06 57.4 178 28.7
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 3.0e-06 57.4 178 28.7
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 5.1e-06 56.6 154 31.2
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 6.6e-06 56.2 168 28.6


User provided reference genes

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