Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 1.1e-110 403.3 208 100.0
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 2.6e-86 322.4 194 86.6
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 7.0e-84 314.3 187 87.2
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.2e-83 313.5 187 86.6
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.6e-83 313.2 186 87.6
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 1.2e-78 297.0 191 82.2
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.7e-77 292.0 198 77.8
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 3.1e-76 288.9 187 82.4
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 3.8e-74 282.0 186 80.1
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 4.2e-73 278.5 186 80.6
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 6.1e-64 248.1 187 71.7
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 3.8e-58 228.8 190 65.8
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 1.6e-51 206.8 190 63.7
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 2.4e-28 129.8 127 56.7
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 1.2e-27 127.5 188 44.7
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 6.0e-27 125.2 124 54.8
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.3e-26 123.2 124 53.2
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 3.9e-26 122.5 161 46.6
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 3.9e-26 122.5 135 51.9
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 5.1e-26 122.1 182 44.0
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 5.1e-26 122.1 127 52.0
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.1e-25 120.9 135 51.9
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.1e-25 120.9 178 41.0
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 4.3e-25 119.0 126 51.6
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 7.3e-25 118.2 125 52.0
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 9.6e-25 117.9 135 51.1
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.2e-24 117.5 139 51.1
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 1.2e-24 117.5 127 51.2
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.6e-24 117.1 125 52.8
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 1.6e-24 117.1 154 42.9
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.6e-24 117.1 140 48.6
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 2.8e-24 116.3 124 51.6
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 3.6e-24 115.9 146 48.6
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.6e-24 115.9 125 53.6
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 8.1e-24 114.8 125 52.0
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 8.1e-24 114.8 138 49.3
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.1e-23 114.4 124 51.6
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 1.8e-23 113.6 134 44.8
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.4e-23 113.2 124 48.4
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.4e-23 113.2 136 49.3
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 3.1e-23 112.8 178 38.8
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 5.3e-23 112.1 126 50.0
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 6.9e-23 111.7 124 50.0
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 6.9e-23 111.7 126 48.4
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 1.2e-22 110.9 128 50.0
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.2e-22 110.9 124 52.4
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 2.0e-22 110.2 183 39.3
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 7.6e-22 108.2 136 49.3
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 2.2e-21 106.7 129 46.5
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.9e-21 105.5 129 46.5
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 6.4e-21 105.1 124 48.4
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 8.4e-21 104.8 130 46.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.9e-20 103.6 132 40.9
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 2.4e-20 103.2 141 44.0
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.2e-20 102.4 129 45.0
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 4.2e-20 102.4 126 46.8
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.4e-20 102.1 129 45.0
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 1.6e-19 100.5 94 53.2
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.7e-19 99.8 135 40.0
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 2.7e-19 99.8 125 44.8
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 2.7e-19 99.8 124 44.4
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.5e-19 99.4 135 40.7
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 3.5e-19 99.4 124 45.2
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 6.0e-19 98.6 118 48.3
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 7.8e-19 98.2 129 44.2
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 1.7e-18 97.1 161 39.1
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 1.1e-17 94.4 110 50.9
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 1.5e-17 94.0 124 40.3
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 4.3e-17 92.4 84 57.1
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 5.6e-17 92.0 114 46.5
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 7.3e-17 91.7 185 35.7
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 7.3e-17 91.7 124 40.3
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 2.8e-16 89.7 119 43.7
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 4.8e-16 89.0 127 44.1
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 6.2e-16 88.6 122 41.8
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 2.4e-15 86.7 126 42.9
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 4.0e-15 85.9 120 39.2
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 3.4e-14 82.8 120 38.3
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 3.4e-14 82.8 107 42.1
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 5.8e-14 82.0 128 35.9
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 2.9e-13 79.7 128 33.6
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 3.8e-13 79.3 184 35.9
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 3.8e-13 79.3 126 35.7
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 4.9e-13 79.0 138 38.4
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.1e-12 77.8 96 47.9
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 1.4e-12 77.4 65 52.3
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 4.2e-12 75.9 63 57.1
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.6e-11 72.4 135 37.8
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.0e-10 71.2 179 30.7
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 1.3e-10 70.9 66 54.5
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 2.3e-10 70.1 94 34.0
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 3.9e-10 69.3 155 31.6
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 4.0e-07 59.3 44 65.9
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 4.5e-06 55.8 66 54.5


User provided reference genes

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