Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.6e-75 285.4 159 100.0
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.2e-73 278.1 157 98.7
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.6e-72 276.2 159 96.9
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 2.1e-72 275.8 159 96.9
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.1e-72 275.8 157 97.5
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 3.6e-72 275.0 159 96.2
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 4.7e-72 274.6 157 96.8
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 8.0e-72 273.9 159 95.6
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 8.0e-72 273.9 159 96.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 5.2e-71 271.2 159 95.0
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 5.2e-71 271.2 159 95.6
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.6e-70 268.9 159 94.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 5.7e-70 267.7 157 94.9
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.3e-69 266.5 156 95.5
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 8.3e-69 263.8 159 93.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 6.5e-66 254.2 150 95.3
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.5e-62 243.0 153 88.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.4e-60 236.5 159 84.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.2e-54 216.9 144 81.9
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 1.5e-54 216.5 149 78.5
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 2.0e-54 216.1 149 79.2
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 2.6e-54 215.7 154 76.6
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 6.3e-53 211.1 150 76.0
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-52 209.9 149 79.9
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.4e-52 209.9 154 74.7
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.8e-52 209.5 147 77.6
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.4e-52 209.1 149 79.9
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.4e-52 209.1 147 77.6
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 4.1e-52 208.4 147 77.6
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 4.1e-52 208.4 155 77.4
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.4e-52 208.0 148 77.7
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 7.0e-52 207.6 152 75.7
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 7.0e-52 207.6 152 75.7
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 7.0e-52 207.6 148 77.7
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 7.0e-52 207.6 154 76.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 9.2e-52 207.2 148 78.4
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.2e-51 206.8 148 76.4
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 2.7e-51 205.7 141 79.4
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.7e-51 205.7 154 75.3
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.5e-51 205.3 154 72.7
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 3.5e-51 205.3 161 72.0
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 3.5e-51 205.3 153 71.2
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.9e-51 204.5 153 76.5
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 5.9e-51 204.5 149 78.5
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 5.9e-51 204.5 150 72.7
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.8e-51 204.1 155 75.5
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 7.8e-51 204.1 148 76.4
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 7.8e-51 204.1 148 76.4
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.7e-50 203.0 149 77.9
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.7e-50 203.0 155 74.8
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 1.7e-50 203.0 148 75.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 1.7e-50 203.0 151 72.2
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.7e-50 203.0 148 76.4
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 2.3e-50 202.6 154 72.7
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.9e-50 201.8 149 75.8
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 5.0e-50 201.4 153 71.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.0e-50 201.4 155 74.2
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.0e-50 201.4 155 74.2
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 6.6e-50 201.1 154 70.8
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 6.6e-50 201.1 154 72.1
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 8.6e-50 200.7 140 77.9
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.9e-49 199.5 153 70.6
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.3e-49 198.7 140 78.6
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 5.6e-49 198.0 149 74.5
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 5.6e-49 198.0 149 74.5
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.2e-48 196.8 142 75.4
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.2e-48 196.8 148 73.6
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 2.1e-48 196.1 146 74.7
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 2.1e-48 196.1 150 76.7
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.1e-48 196.1 145 72.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 6.2e-48 194.5 149 73.2
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.0e-47 193.7 154 70.1
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.8e-47 193.0 154 67.5
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 2.3e-47 192.6 147 70.7
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 6.8e-47 191.0 149 70.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.2e-46 190.3 144 71.5
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.2e-46 190.3 134 78.4
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 4.4e-46 188.3 145 69.7
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 9.8e-46 187.2 149 68.5
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 6.4e-45 184.5 148 69.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 6.4e-45 184.5 148 69.6
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 6.4e-45 184.5 142 69.0
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.4e-44 181.4 153 68.6
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 7.0e-44 181.0 149 69.8
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.2e-43 180.3 145 68.3
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.2e-43 180.3 149 66.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 3.5e-43 178.7 145 66.2
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 8.6e-42 174.1 144 65.3
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.5e-41 173.3 154 64.9
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 3.3e-41 172.2 147 68.0
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 5.6e-41 171.4 143 62.9
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 3.6e-40 168.7 154 66.2
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 6.8e-39 164.5 148 66.2
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 4.4e-38 161.8 150 65.3
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.1e-36 157.1 122 73.8
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 4.1e-36 155.2 148 63.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.2e-35 153.7 212 47.2
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.6e-35 153.3 113 77.9
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.7e-35 152.5 154 60.4
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.5e-35 152.1 151 62.3
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 6.0e-35 151.4 153 54.2
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 3.0e-34 149.1 110 75.5
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 8.6e-34 147.5 154 57.1
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.3e-33 145.6 148 60.8
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 9.5e-33 144.1 138 54.3
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.6e-32 142.1 138 58.7
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.1e-32 141.0 144 59.0
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.1e-31 139.0 175 53.1
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 2.6e-30 136.0 151 58.3
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.3e-29 133.7 111 70.3
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 8.4e-29 131.0 114 64.0
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.9e-28 129.8 107 65.4
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.2e-28 129.0 110 65.5
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.1e-27 126.3 151 55.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.1e-27 126.3 151 55.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 2.1e-27 126.3 150 56.0
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 3.5e-27 125.6 141 48.2
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.0e-26 124.0 106 65.1
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.7e-26 123.2 120 58.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.1e-25 120.6 92 75.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 6.8e-23 111.3 126 58.7
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.4e-21 104.4 81 74.1
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 9.0e-15 84.3 65 70.8
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 1.4e-12 77.0 146 37.7
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 8.7e-10 67.8 128 41.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 7.3e-09 64.7 45 71.1
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.3e-08 63.9 54 57.4
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 1.8e-07 60.1 44 68.2
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 3.1e-07 59.3 138 29.7


User provided reference genes

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