Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.1e-75 285.0 142 100.0
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.0e-70 268.5 142 93.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 4.3e-69 264.6 142 92.3
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 5.6e-69 264.2 142 92.3
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 5.6e-69 264.2 142 92.3
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-68 262.7 142 91.5
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.6e-68 262.7 142 91.5
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.8e-68 261.9 142 90.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.1e-67 258.5 143 89.5
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 5.3e-67 257.7 143 88.8
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.9e-67 257.3 143 88.8
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-65 253.1 143 88.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.7e-65 252.7 143 88.8
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.1e-63 245.7 140 87.1
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 7.9e-63 243.8 139 87.1
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 7.9e-63 243.8 138 86.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.3e-62 243.0 142 85.9
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 5.1e-62 241.1 142 82.4
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 7.4e-61 237.3 134 88.1
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 8.2e-52 207.2 140 72.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.4e-48 196.4 139 69.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.4e-48 196.4 138 68.1
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 7.2e-48 194.1 138 68.8
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.2e-47 193.4 139 68.3
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.1e-47 192.6 140 66.4
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.1e-47 192.6 140 66.4
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.7e-47 192.2 137 66.4
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 3.6e-47 191.8 136 67.6
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.6e-47 191.4 136 69.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 4.6e-47 191.4 140 62.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 4.6e-47 191.4 138 68.1
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 4.6e-47 191.4 137 68.6
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.6e-47 191.4 138 66.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 6.1e-47 191.0 138 65.2
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 6.1e-47 191.0 136 68.4
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.1e-47 191.0 138 68.1
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.4e-46 189.9 140 67.1
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.4e-46 189.9 136 69.1
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.4e-46 189.9 138 65.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 3.0e-46 188.7 137 67.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.9e-46 188.3 137 67.2
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.9e-46 188.3 136 68.4
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.9e-46 188.3 138 67.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 5.1e-46 188.0 138 65.9
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 5.1e-46 188.0 135 68.9
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.1e-46 188.0 138 66.7
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 6.7e-46 187.6 140 67.1
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 8.8e-46 187.2 140 65.7
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 8.8e-46 187.2 140 62.9
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.1e-45 186.8 141 65.2
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.1e-45 186.8 137 67.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.1e-45 186.8 138 64.5
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.1e-45 186.8 136 64.7
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.0e-45 186.0 136 64.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.6e-45 185.7 106 83.0
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-45 185.7 136 65.4
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.3e-45 185.3 137 66.4
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.3e-45 185.3 137 66.4
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 4.4e-45 184.9 138 64.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 7.4e-45 184.1 140 64.3
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 7.4e-45 184.1 138 63.0
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.7e-44 183.0 138 65.2
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.7e-44 183.0 138 61.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.2e-44 182.6 136 66.9
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.8e-44 182.2 136 64.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 2.8e-44 182.2 140 62.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.7e-44 181.8 138 62.3
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 6.3e-44 181.0 138 66.7
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.1e-43 180.3 141 61.7
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.1e-43 180.3 137 64.2
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.1e-43 180.3 137 64.2
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.1e-43 180.3 140 65.0
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.4e-43 179.9 140 65.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.4e-43 179.9 136 63.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.4e-43 179.9 138 65.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-43 179.9 140 62.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.8e-43 179.5 138 63.0
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 2.4e-43 179.1 136 61.8
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 3.1e-43 178.7 140 60.7
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 3.1e-43 178.7 140 60.7
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.1e-43 178.3 136 61.8
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 4.1e-43 178.3 135 64.4
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.2e-42 176.8 138 60.1
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.5e-42 176.4 138 65.2
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.5e-42 176.4 136 64.7
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.6e-42 175.6 133 65.4
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 3.4e-42 175.3 138 59.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 7.7e-42 174.1 138 60.1
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.7e-41 172.9 135 61.5
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.2e-41 172.6 142 59.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 5.0e-41 171.4 124 67.7
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 5.0e-41 171.4 124 67.7
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.1e-40 170.2 137 62.0
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.4e-40 169.9 121 68.6
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.9e-40 169.5 124 66.9
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.5e-40 169.1 119 69.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 3.2e-40 168.7 121 70.2
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.2e-40 168.3 138 61.6
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.6e-39 166.4 121 69.4
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.1e-39 166.0 139 60.4
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-38 163.3 132 59.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-38 163.3 132 59.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.8e-38 160.6 85 87.1
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.3e-37 158.7 138 57.2
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 7.4e-37 157.5 112 65.2
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 9.7e-37 157.1 141 56.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.3e-36 156.8 135 58.5
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 8.2e-36 154.1 104 66.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.1e-35 153.7 119 62.2
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.4e-35 153.3 104 67.3
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.6e-34 149.8 141 52.5
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.0e-34 149.4 137 57.7
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 4.5e-34 148.3 136 53.7
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.0e-33 147.1 103 67.0
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 3.8e-33 145.2 133 56.4
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.0e-33 144.8 114 61.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.6e-31 138.7 121 53.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.4e-30 136.7 121 56.2
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.0e-30 135.6 119 52.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 5.2e-30 134.8 110 60.0
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.5e-29 133.3 116 53.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.3e-28 130.2 126 50.8
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.4e-27 126.7 118 51.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 9.1e-27 124.0 94 68.1
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.0e-25 120.6 97 63.9
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 9.4e-24 114.0 83 61.4
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.0e-22 110.5 88 63.6
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.4e-22 110.2 120 46.7
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.2e-18 97.1 90 52.2
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.9e-14 80.9 91 50.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 4.4e-13 78.6 91 45.1


User provided reference genes

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