Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 7.5e-78 293.9 160 100.0
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 5.0e-74 281.2 163 95.1
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 1.6e-72 276.2 163 93.9
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 2.0e-70 269.2 163 91.4
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 9.8e-70 266.9 163 90.2
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 2.4e-68 262.3 160 89.4
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 3.6e-64 248.4 163 84.0
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 3.1e-63 245.4 162 84.0
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 3.1e-63 245.4 148 89.9
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 1.2e-62 243.4 148 89.2
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 1.2e-62 243.4 148 89.2
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 2.0e-62 242.7 149 89.9
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 5.4e-60 234.6 161 82.0
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 3.6e-56 221.9 165 77.0
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 1.1e-55 220.3 165 75.8
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 1.9e-49 199.5 166 68.7
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 3.1e-47 192.2 167 68.3
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 1.5e-46 189.9 169 68.6
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 2.6e-46 189.1 170 68.8
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 4.4e-46 188.3 166 68.7
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 5.8e-46 188.0 169 66.3
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 1.3e-45 186.8 166 67.5
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.3e-45 186.8 163 67.5
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 2.2e-45 186.0 169 65.1
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 8.4e-45 184.1 168 66.7
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 1.1e-44 183.7 165 64.8
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 1.1e-44 183.7 166 66.9
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 1.9e-44 183.0 164 67.7
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 4.2e-44 181.8 167 65.9
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 5.4e-44 181.4 166 65.7
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 7.1e-44 181.0 163 66.9
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 7.1e-44 181.0 164 64.0
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 7.1e-44 181.0 171 63.7
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 9.2e-44 180.6 163 65.6
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.2e-43 180.3 159 65.4
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 1.6e-43 179.9 149 68.5
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 1.6e-43 179.9 163 61.3
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.7e-42 176.4 168 64.3
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 3.0e-42 175.6 167 62.3
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 5.1e-42 174.9 149 66.4
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.5e-41 173.3 167 65.9
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 7.3e-41 171.0 169 61.5
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 2.1e-40 169.5 161 64.6
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 1.4e-39 166.8 139 69.1
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 2.4e-39 166.0 167 60.5
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 6.9e-39 164.5 146 65.1
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 6.9e-39 164.5 185 58.9
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 2.6e-38 162.5 168 59.5
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 4.4e-38 161.8 166 60.8
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 4.4e-38 161.8 166 60.8
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 5.8e-38 161.4 160 61.9
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 7.6e-38 161.0 150 63.3
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 9.9e-38 160.6 156 62.8
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 2.2e-37 159.5 168 58.9
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 2.2e-37 159.5 160 57.5
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 2.2e-37 159.5 160 57.5
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 2.9e-37 159.1 169 57.4
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 4.9e-37 158.3 163 58.9
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 4.9e-37 158.3 169 59.2
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 1.1e-36 157.1 155 61.9
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 1.1e-36 157.1 152 60.5
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 1.9e-36 156.4 152 60.5
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 1.9e-36 156.4 144 60.4
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 2.4e-36 156.0 147 61.9
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 2.4e-36 156.0 149 62.4
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 9.3e-36 154.1 171 59.1
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 9.3e-36 154.1 160 59.4
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 1.6e-35 153.3 131 67.2
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 2.1e-35 152.9 163 58.3
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 6.0e-35 151.4 158 59.5
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 1.0e-34 150.6 129 69.0
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 1.0e-34 150.6 129 69.0
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 2.3e-34 149.4 169 57.4
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.0e-34 149.1 155 61.9
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 3.9e-34 148.7 184 53.8
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 5.1e-34 148.3 162 58.0
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 6.6e-34 147.9 151 60.3
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 8.7e-34 147.5 153 54.9
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 1.5e-33 146.7 127 66.9
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 3.3e-33 145.6 152 59.2
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 3.3e-33 145.6 159 57.2
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 5.6e-33 144.8 152 59.2
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.3e-32 143.7 166 56.6
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 1.3e-32 143.7 165 55.2
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 2.1e-32 142.9 142 59.2
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.1e-32 142.9 152 59.2
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 2.8e-32 142.5 156 57.1
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.8e-32 142.5 152 58.6
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 2.8e-32 142.5 172 54.1
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 4.8e-32 141.7 155 56.1
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 6.2e-32 141.4 190 50.0
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 6.2e-32 141.4 145 58.6
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 8.1e-32 141.0 157 57.3
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 1.4e-31 140.2 110 73.6
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 1.4e-31 140.2 146 54.8
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 5.3e-31 138.3 160 53.8
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 6.9e-31 137.9 110 72.7
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 9.0e-31 137.5 120 67.5
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 1.2e-30 137.1 148 52.7
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 1.7e-29 133.3 133 60.2
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 3.8e-29 132.1 141 53.9
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 3.8e-29 132.1 146 59.6
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 8.4e-29 131.0 153 54.9
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.1e-28 130.6 155 57.4
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 3.2e-28 129.0 154 52.6
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 5.4e-28 128.3 178 49.4
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 1.2e-27 127.1 156 54.5
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 2.1e-27 126.3 127 57.5
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 5.1e-26 121.7 163 50.3
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 6.7e-26 121.3 166 49.4
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.1e-25 120.6 162 49.4
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 1.1e-25 120.6 151 51.0
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 5.6e-25 118.2 154 48.7
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.1e-23 114.0 111 58.6
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.4e-23 113.6 160 48.1
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 3.1e-23 112.5 114 64.0
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 5.3e-23 111.7 97 68.0
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 1.2e-22 110.5 146 50.0
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 1.2e-22 110.5 102 62.7
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 3.4e-22 109.0 111 61.3
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 3.4e-22 109.0 146 52.1
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 5.8e-22 108.2 163 48.5
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 7.6e-22 107.8 113 58.4
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 7.6e-22 107.8 165 49.1
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 3.8e-21 105.5 115 59.1
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 1.2e-19 100.5 171 43.9
BraA02t09201Z Brassica rapa HOM05D004927 ORTHO05D005798 1.1e-17 94.0 89 67.4
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 1.9e-17 93.2 93 61.3
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 5.6e-17 91.7 93 55.9
A02p42760 Brassica napus HOM05D001512 ORTHO05D001574 1.3e-16 90.5 57 87.7
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 3.7e-16 89.0 109 51.4
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 6.2e-16 88.2 141 44.0
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 1.4e-15 87.0 64 67.2
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 3.1e-15 85.9 83 59.0
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.3e-13 80.5 88 53.4
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.7e-13 80.1 72 61.1
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.7e-13 80.1 72 61.1
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.7e-13 80.1 72 61.1
Gohir.D11G291800 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.4e-12 77.0 54 72.2
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 1.6e-11 73.6 81 56.8
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 2.3e-10 69.7 84 53.6
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla HOM05D004927 ORTHO05D005798 2.3e-10 69.7 80 61.2
Gohir.D09G247201 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.5e-09 67.0 64 60.9
Oeu037712.1 Olea europaea HOM05D004927 ORTHO05D005798 2.5e-09 66.2 42 73.8
SEGI_01314 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 2.5e-09 66.2 45 73.3
AUR62029623 Chenopodium quinoa HOM05D004927 ORTHO05D005798 4.3e-09 65.5 275 29.1
Cpa.g.sc13.128 Carica papaya HOM05D004927 ORTHO05D005798 1.1e-07 60.8 59 62.7
ECA232G0032 Erigeron canadensis HOM05D004927 ORTHO05D005798 3.4e-06 55.8 97 45.4


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