Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 0.0e+00 1327.8 666 100.0
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 0.0e+00 1125.2 669 85.8
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 7.7e-294 1013.4 660 80.6
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.0e-285 986.5 667 79.2
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 2.2e-285 985.3 670 78.7
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 5.5e-284 980.7 668 79.3
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 3.7e-280 968.0 665 80.0
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 3.1e-279 964.9 666 79.3
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.2e-278 963.0 667 79.3
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 8.9e-274 946.8 694 76.2
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 3.7e-264 914.8 666 75.1
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 5.0e-261 904.4 689 72.7
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 1.5e-241 839.7 710 64.9
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 1.6e-238 829.7 686 65.3
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 4.2e-167 592.4 809 46.8
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 1.8e-154 550.4 762 46.6
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 3.9e-152 542.7 682 52.2
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 1.3e-144 517.7 703 47.8
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 6.6e-144 515.4 707 46.7
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 1.5e-143 514.2 869 41.8
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 1.5e-143 514.2 771 44.9
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 5.6e-143 512.3 743 47.5
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 5.6e-143 512.3 748 47.3
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 5.6e-143 512.3 764 45.3
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 9.5e-143 511.5 869 41.9
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 4.7e-142 509.2 742 46.2
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 1.1e-141 508.1 758 46.7
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.4e-141 507.7 771 44.6
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 2.6e-140 503.4 752 45.3
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 6.4e-139 498.8 736 46.3
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 4.1e-138 496.1 897 40.4
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 7.1e-138 495.4 757 46.5
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 9.2e-138 495.0 707 46.1
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 1.6e-137 494.2 774 43.7
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.0e-136 491.5 718 45.3
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.0e-136 491.5 694 47.8
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 3.9e-136 489.6 702 46.7
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.5e-135 486.9 736 45.2
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 2.8e-134 483.4 733 43.5
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 3.6e-134 483.0 731 43.9
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.4e-133 481.1 712 46.3
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 3.1e-133 479.9 780 43.3
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 4.4e-132 476.1 701 45.1
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 1.7e-131 474.2 779 41.6
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 1.7e-131 474.2 680 46.8
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.9e-130 470.7 501 55.1
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 7.1e-130 468.8 871 40.0
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 7.1e-130 468.8 758 41.6
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 3.0e-128 463.4 557 52.2
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 3.9e-128 463.0 500 53.8
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 6.6e-128 462.2 484 56.2
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.1e-127 461.5 479 55.3
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.2e-126 458.0 769 44.0
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 1.2e-126 458.0 854 40.3
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 2.1e-126 457.2 893 39.6
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 2.8e-126 456.8 642 46.7
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 6.2e-126 455.7 970 36.5
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.4e-125 454.5 909 38.7
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.4e-125 454.5 768 43.0
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.8e-125 454.1 504 52.4
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.8e-125 454.1 909 39.4
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 2.4e-125 453.8 870 40.9
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 3.1e-125 453.4 489 55.0
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 4.0e-125 453.0 830 41.8
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 4.0e-125 453.0 641 46.8
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 5.2e-125 452.6 780 41.9
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 5.2e-125 452.6 884 39.0
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 6.9e-125 452.2 503 54.1
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 2.2e-123 447.2 823 40.1
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 2.2e-123 447.2 502 52.6
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 3.8e-123 446.4 761 42.2
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 3.8e-123 446.4 488 53.7
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 4.9e-123 446.0 619 47.7
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 3.2e-122 443.4 684 47.1
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 9.3e-122 441.8 512 53.3
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 1.2e-121 441.4 461 54.9
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 2.1e-121 440.7 495 52.3
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 3.0e-120 436.8 391 59.6
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 2.5e-119 433.7 675 43.3
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 5.6e-119 432.6 663 45.2
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 3.6e-118 429.9 516 51.9
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 3.6e-118 429.9 527 51.4
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.4e-117 427.2 719 43.1
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 2.0e-116 424.1 618 46.4
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 3.4e-116 423.3 501 51.5
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 1.3e-112 411.4 509 50.7
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 3.7e-110 403.3 396 55.6
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 4.0e-109 399.8 745 42.1
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 9.0e-109 398.7 463 51.6
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 1.2e-108 398.3 395 55.7
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 4.9e-107 392.9 514 48.6
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 8.4e-107 392.1 551 47.4
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 4.2e-106 389.8 504 49.8
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 1.8e-104 384.4 744 39.5
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 1.8e-101 374.4 421 51.8
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 9.0e-101 372.1 391 55.8
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 3.4e-100 370.2 847 35.4
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 2.5e-90 337.4 519 46.2
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 2.7e-89 334.0 299 61.5
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 4.6e-89 333.2 497 45.7
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 4.3e-87 326.6 349 54.2
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 2.2e-83 314.3 775 36.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 2.2e-70 271.2 642 34.3
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 9.1e-69 265.8 544 39.2
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 5.0e-59 233.4 273 53.5
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 8.9e-40 169.5 197 45.7
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 2.4e-37 161.4 206 50.0
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.3e-34 150.6 186 46.8
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 9.5e-26 122.9 98 62.2
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 2.7e-20 104.8 89 58.4
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 1.5e-15 89.0 81 56.8
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 7.6e-15 86.7 77 57.1
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 1.9e-13 82.0 77 55.8
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 8.4e-06 56.6 124 34.7


User provided reference genes

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