Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.4e-215 751.9 383 100.0
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-174 616.7 386 81.1
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-174 616.7 386 81.9
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-174 615.9 386 81.9
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 2.1e-174 615.9 386 81.9
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 3.5e-174 615.1 386 81.9
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 1.0e-173 613.6 387 82.2
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 7.3e-172 607.4 395 80.0
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 2.4e-170 602.4 391 79.8
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 7.6e-169 597.4 376 80.6
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 1.9e-156 556.2 367 77.9
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.5e-151 539.3 376 72.9
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 2.5e-151 539.3 376 72.9
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 9.3e-151 537.3 376 72.9
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 7.9e-142 507.7 368 69.8
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-137 493.0 376 70.7
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 4.5e-121 438.7 281 79.7
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 4.5e-121 438.7 281 79.7
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.0e-101 374.4 387 56.6
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 3.4e-92 342.8 351 57.0
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-90 337.4 205 84.4
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 1.4e-90 337.4 205 84.4
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-83 313.2 388 47.4
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 2.9e-83 313.2 388 47.4
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 3.2e-82 309.7 387 47.3
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 3.2e-82 309.7 387 47.3
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 3.2e-82 309.7 387 47.3
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 5.0e-80 302.4 387 47.5
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 4.0e-77 292.7 369 46.6
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 1.0e-72 278.1 178 81.5
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.3e-67 261.2 376 39.6
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 4.2e-42 176.4 195 51.3
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.2e-41 174.9 195 50.3
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 1.6e-41 174.5 210 48.1
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.0e-40 171.8 193 50.3
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 6.7e-40 169.1 195 50.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.5e-39 167.2 195 45.6
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 2.5e-39 167.2 195 45.6
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 4.3e-39 166.4 195 45.6
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 4.3e-39 166.4 195 45.6
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 4.3e-39 166.4 185 50.3
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 7.4e-39 165.6 186 47.8
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 9.6e-39 165.2 194 49.5
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 9.6e-39 165.2 196 49.5
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 3.7e-38 163.3 208 47.1
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 4.8e-38 162.9 195 49.7
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.8e-37 161.0 196 48.5
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 4.0e-37 159.8 186 48.9
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 5.3e-37 159.5 195 46.2
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 9.0e-37 158.7 186 48.4
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 9.0e-37 158.7 186 48.4
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 2.2e-35 154.1 191 45.5
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 8.4e-35 152.1 184 47.8
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 3.2e-34 150.2 184 45.1
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.6e-33 147.9 186 47.3
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 6.0e-33 146.0 195 45.6
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 1.0e-32 145.2 190 45.3
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 1.3e-32 144.8 360 30.6
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 3.0e-32 143.7 193 43.5
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 3.9e-32 143.3 190 45.8
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.1e-32 142.9 173 46.2
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 6.7e-32 142.5 190 45.8
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-31 141.4 189 44.4
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.5e-31 141.4 354 32.2
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-31 141.0 190 45.3
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-31 141.0 190 45.3
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 3.3e-31 140.2 186 43.0
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 5.7e-31 139.4 189 46.6
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 1.6e-30 137.9 186 43.5
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 6.3e-30 136.0 186 42.5
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 6.3e-30 136.0 186 42.5
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 1.4e-29 134.8 187 43.3
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.4e-29 134.8 165 42.4
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 2.4e-29 134.0 189 44.4
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 6.9e-29 132.5 82 80.5
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.2e-28 131.7 187 42.2
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 2.6e-28 130.6 190 40.5
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 2.6e-28 130.6 190 40.5
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 5.9e-28 129.4 192 41.1
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 7.6e-28 129.0 184 41.8
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 7.6e-28 129.0 184 41.8
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.2e-27 127.5 186 40.3
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.2e-27 127.5 186 40.3
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 2.9e-27 127.1 190 39.5
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-27 127.1 192 40.6
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 2.9e-27 127.1 190 39.5
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 2.9e-27 127.1 190 39.5
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 5.0e-27 126.3 187 40.1
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 5.0e-27 126.3 186 39.8
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.0e-27 126.3 173 41.0
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 6.5e-27 125.9 186 40.9
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 8.5e-27 125.6 186 39.8
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 7.2e-26 122.5 186 39.8
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-23 115.2 186 39.8
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 4.3e-23 113.2 116 48.3
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.6e-22 111.3 187 36.4
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.8e-21 107.8 198 38.4
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 4.5e-20 103.2 117 48.7
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 3.3e-15 87.0 138 34.8
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-13 82.0 109 42.2
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 1.4e-13 81.6 109 43.1
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 6.9e-13 79.3 146 32.9
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.7e-11 74.7 168 33.3
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 1.9e-10 71.2 197 30.5
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 1.9e-10 71.2 176 30.7
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.2e-10 70.5 167 28.7
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.2e-10 70.5 167 28.7
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.2e-10 70.5 167 28.7
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 2.7e-09 67.4 154 31.2
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 4.7e-09 66.6 179 29.1
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.4e-08 65.1 171 31.6
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.0e-08 63.9 196 26.5
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 6.7e-08 62.8 169 31.4
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 4.4e-07 60.1 194 29.4
BcaC06g33640 Brassica carinata HOM05D007461 ORTHO05D093415 1.7e-06 58.2 69 42.0
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 2.8e-06 57.4 153 28.8
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 4.8e-06 56.6 202 25.7
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 4.8e-06 56.6 187 28.9


User provided reference genes

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