Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.4e-206 721.5 377 100.0
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 7.7e-198 693.7 377 95.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.6e-195 684.5 377 93.9
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.9e-195 683.7 377 94.2
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 6.7e-194 680.6 375 93.9
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 2.8e-192 675.2 373 93.6
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 3.1e-191 671.8 377 93.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 5.3e-191 671.0 378 92.6
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.5e-190 669.5 378 93.1
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.5e-190 669.5 377 92.0
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 3.4e-190 668.3 378 92.9
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 5.9e-190 667.5 377 91.5
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.7e-189 666.0 378 92.3
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.7e-189 666.0 378 92.3
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.7e-189 666.0 378 92.6
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.6e-179 632.9 395 84.1
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 2.5e-172 609.0 377 83.3
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 6.4e-152 541.2 379 73.4
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 8.3e-152 540.8 379 74.1
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 8.3e-152 540.8 379 74.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 8.3e-152 540.8 379 73.1
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 6.6e-149 531.2 377 72.9
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.1e-148 530.4 379 73.1
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.1e-148 530.4 379 71.2
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 2.5e-148 529.3 379 71.8
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.3e-148 528.5 380 71.3
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 5.6e-148 528.1 377 71.9
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 2.1e-147 526.2 380 70.5
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 2.1e-147 526.2 407 68.3
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 2.1e-147 526.2 380 71.1
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 8.0e-147 524.2 379 71.5
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 1.0e-146 523.9 380 70.5
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.4e-146 523.5 379 71.5
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.8e-146 523.1 379 71.2
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 4.0e-146 521.9 380 71.6
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 6.8e-146 521.2 354 74.6
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 6.8e-146 521.2 380 71.1
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.5e-145 520.0 379 72.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.5e-145 520.0 378 70.4
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.0e-145 519.6 380 69.7
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.0e-145 519.6 379 71.2
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.6e-145 519.2 379 69.7
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 3.4e-145 518.8 379 69.7
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 4.4e-145 518.5 382 71.5
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.9e-144 515.8 399 68.2
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.3e-144 514.2 380 69.7
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.1e-143 513.8 381 69.6
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.9e-143 513.1 377 69.0
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.4e-143 512.7 379 70.7
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 5.4e-143 511.5 380 68.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 9.2e-143 510.8 403 66.0
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.2e-142 510.4 379 70.2
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.6e-142 510.0 409 65.3
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 7.8e-142 507.7 383 70.0
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.0e-141 507.3 388 70.1
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.7e-141 506.5 379 68.3
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.7e-141 506.5 379 67.3
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 2.3e-141 506.1 370 71.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 3.9e-141 505.4 379 67.5
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.9e-140 503.1 378 68.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.1e-139 499.6 382 68.1
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 2.8e-139 499.2 385 68.8
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.1e-139 497.7 389 66.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.3e-138 496.1 380 66.8
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.1e-138 495.7 379 67.5
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.0e-138 495.4 378 66.1
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 8.9e-138 494.2 379 67.3
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.2e-137 493.8 379 66.5
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 5.8e-137 491.5 377 67.9
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 7.5e-137 491.1 379 65.4
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.3e-136 490.3 378 65.6
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.7e-136 490.0 432 61.8
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.2e-136 489.6 277 92.4
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.1e-135 487.3 378 65.9
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 2.4e-135 486.1 380 66.1
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.6e-134 483.4 434 61.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.1e-134 483.0 378 64.6
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.7e-134 482.6 377 67.4
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 4.6e-134 481.9 432 61.1
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.3e-133 480.3 404 63.1
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.3e-133 479.6 380 64.2
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 6.6e-133 478.0 383 64.5
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 1.1e-132 477.2 384 64.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 8.1e-131 471.1 377 64.7
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 4.0e-130 468.8 386 63.5
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-129 466.5 410 61.2
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.6e-129 466.1 379 63.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 5.8e-129 464.9 362 68.5
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.4e-127 460.3 379 63.6
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 4.1e-127 458.8 382 62.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 2.1e-126 456.4 324 72.2
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.8e-126 454.5 382 61.5
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.6e-123 445.7 379 63.3
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 6.8e-122 441.4 378 61.6
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 8.4e-120 434.5 388 59.8
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.6e-118 430.3 459 52.5
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 7.3e-116 421.4 331 65.0
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 6.2e-115 418.3 382 58.9
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.1e-114 417.5 383 57.7
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.0e-109 401.0 276 75.4
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.7e-109 400.2 384 57.3
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 3.0e-109 399.4 410 56.6
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.3e-108 395.6 382 55.8
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.8e-107 392.9 385 55.1
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 7.6e-97 358.2 387 52.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.4e-76 288.5 158 93.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.8e-74 283.9 158 93.0
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.0e-73 280.4 158 91.8
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.0e-68 263.8 245 56.3
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 5.7e-68 262.3 417 39.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 4.5e-65 252.7 460 37.4
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.1e-62 243.8 158 82.9
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 8.8e-53 211.8 342 42.1
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 8.8e-45 185.3 147 67.3
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 5.6e-39 166.0 163 49.7
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.5e-36 157.9 129 61.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 5.7e-36 156.0 86 94.2
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.6e-33 146.4 126 60.3
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.0e-29 135.2 108 64.8
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 3.4e-28 130.2 102 58.8
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 3.9e-24 116.7 103 53.4
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 8.6e-24 115.5 90 65.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.3e-11 75.1 124 39.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.6e-09 68.2 160 31.9
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 5.1e-08 63.2 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.1e-07 62.0 39 76.9
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 7.3e-07 59.3 115 37.4


User provided reference genes

Program Settings