Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g24450 Schrenkiella parvula HOM05D004709 ORTHO05D005669 4.0e-41 171.0 88 100.0
A03p46850 Brassica napus HOM05D004709 ORTHO05D005669 2.3e-36 155.2 88 87.5
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 2.3e-36 155.2 88 88.6
AL8G37880 Arabidopsis lyrata HOM05D004709 ORTHO05D005669 5.1e-36 154.1 88 87.5
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 8.7e-36 153.3 88 87.5
Thhalv10005205m.g Eutrema salsugineum HOM05D004709 ORTHO05D005669 1.1e-35 152.9 88 87.5
BcaC07g40932 Brassica carinata HOM05D004709 ORTHO05D005669 1.9e-35 152.1 88 86.4
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 1.9e-35 152.1 88 87.5
C08p39260 Brassica napus HOM05D004709 ORTHO05D005669 1.9e-35 152.1 88 86.4
BraA03t13805Z Brassica rapa HOM05D004709 ORTHO05D005669 1.9e-35 152.1 88 86.4
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 2.5e-35 151.8 88 86.4
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 2.5e-35 151.8 88 86.4
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 2.5e-35 151.8 88 86.4
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 2.5e-35 151.8 88 86.4
BcaC06g33217 Brassica carinata HOM05D004709 ORTHO05D005669 3.3e-35 151.4 86 87.2
C07p44900 Brassica napus HOM05D004709 ORTHO05D005669 9.6e-35 149.8 88 85.2
BolC7t45013H Brassica oleracea HOM05D004709 ORTHO05D005669 9.6e-35 149.8 88 85.2
BcaC03g18433 Brassica carinata HOM05D004709 ORTHO05D005669 2.8e-34 148.3 88 85.2
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 2.8e-34 148.3 88 84.1
C02p63420 Brassica napus HOM05D004709 ORTHO05D005669 2.8e-34 148.3 88 85.2
BolC2t12409H Brassica oleracea HOM05D004709 ORTHO05D005669 2.8e-34 148.3 88 85.2
C03p89860 Brassica napus HOM05D004709 ORTHO05D005669 3.7e-34 147.9 88 84.1
AT5G61220 Arabidopsis thaliana HOM05D004709 ORTHO05D005669 6.2e-34 147.1 88 84.1
BolC6t39173H Brassica oleracea HOM05D004709 ORTHO05D005669 8.1e-34 146.7 88 83.0
C06p42660 Brassica napus HOM05D004709 ORTHO05D005669 2.4e-33 145.2 88 83.0
Carub.0008s2188 Capsella rubella HOM05D004709 ORTHO05D005669 1.2e-32 142.9 88 79.5
CARHR274970 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.2e-32 142.9 88 81.8
BcaC06g33172 Brassica carinata HOM05D004709 ORTHO05D005669 1.3e-31 139.4 88 81.8
C05p13760 Brassica napus HOM05D004709 ORTHO05D005669 6.9e-25 117.1 76 80.3
BolC5t30114H Brassica oleracea HOM05D004709 ORTHO05D005669 6.9e-25 117.1 76 80.3
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 9.0e-25 116.7 85 69.4
BcaC05g25635 Brassica carinata HOM05D004709 ORTHO05D005669 9.0e-25 116.7 76 80.3
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 4.5e-24 114.4 76 77.6
Carub.0006s3376 Capsella rubella HOM05D004709 ORTHO05D005669 5.8e-24 114.0 83 71.1
THA.LOC104801321 Tarenaya hassleriana HOM05D004709 ORTHO05D005669 1.9e-22 109.0 86 62.8
BcaC03g15765 Brassica carinata HOM05D004709 ORTHO05D005669 5.5e-22 107.5 88 70.5
CAN.G479.31 Capsicum annuum HOM05D004709 ORTHO05D005669 4.6e-21 104.4 80 63.8
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 4.6e-21 104.4 84 60.7
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 4.6e-21 104.4 82 62.2
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 1.0e-20 103.2 82 61.0
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 1.8e-20 102.4 82 62.2
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 2.3e-20 102.1 82 58.5
Solyc03g115490.1 Solanum lycopersicum HOM05D004709 ORTHO05D005669 3.0e-20 101.7 79 60.8
Sopen03g034490 Solanum pennellii HOM05D004709 ORTHO05D005669 3.0e-20 101.7 79 60.8
PGSC0003DMG400024653 Solanum tuberosum HOM05D004709 ORTHO05D005669 3.0e-20 101.7 79 60.8
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 5.1e-20 100.9 82 57.3
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 8.7e-20 100.1 82 62.2
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.1e-19 99.8 82 58.5
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 1.1e-19 99.8 82 57.3
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 1.5e-19 99.4 82 58.5
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 1.5e-19 99.4 80 58.8
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 1.5e-19 99.4 80 58.8
CiPaw.11G049800 Carya illinoinensis HOM05D004709 ORTHO05D005669 1.9e-19 99.0 82 57.3
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.9e-19 99.0 82 58.5
CARHR099960 Cardamine hirsuta HOM05D004709 ORTHO05D005669 3.3e-19 98.2 66 77.3
ClCG06G015840 Citrullus lanatus HOM05D004709 ORTHO05D005669 4.3e-19 97.8 80 60.0
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 4.3e-19 97.8 82 58.5
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 5.7e-19 97.4 80 57.5
Sed0002201 Sechium edule HOM05D004709 ORTHO05D005669 5.7e-19 97.4 84 56.0
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 7.4e-19 97.1 82 57.3
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 7.4e-19 97.1 83 53.0
Sed0019301 Sechium edule HOM05D004709 ORTHO05D005669 7.4e-19 97.1 82 57.3
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 9.7e-19 96.7 83 56.6
Lalb_Chr10g0093091 Lupinus albus HOM05D004709 ORTHO05D005669 1.3e-18 96.3 83 55.4
MD09G1062400 Malus domestica HOM05D004709 ORTHO05D005669 1.3e-18 96.3 82 54.9
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 1.6e-18 95.9 83 54.2
PGR083G1512 Punica granatum HOM05D004709 ORTHO05D005669 2.2e-18 95.5 83 57.8
QL10p018658 Quercus lobata HOM05D004709 ORTHO05D005669 2.2e-18 95.5 82 56.1
Sed0023667 Sechium edule HOM05D004709 ORTHO05D005669 2.2e-18 95.5 81 58.0
Sc10g0003220 Simmondsia chinensis HOM05D004709 ORTHO05D005669 2.2e-18 95.5 81 56.8
Ah.10g032000 Amaranthus hybridus HOM05D004709 ORTHO05D005669 2.8e-18 95.1 85 52.9
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 2.8e-18 95.1 83 51.8
Prupe.3G258000 Prunus persica HOM05D004709 ORTHO05D005669 2.8e-18 95.1 83 54.2
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 3.7e-18 94.7 84 51.2
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 3.7e-18 94.7 82 56.1
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 4.8e-18 94.4 78 55.1
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 4.8e-18 94.4 82 56.1
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 4.8e-18 94.4 80 58.8
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 6.3e-18 94.0 78 59.0
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 6.3e-18 94.0 78 59.0
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 6.3e-18 94.0 82 56.1
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 6.3e-18 94.0 83 50.6
ATR0064G063 Amborella trichopoda HOM05D004709 ORTHO05D005669 8.2e-18 93.6 83 51.8
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 8.2e-18 93.6 86 51.2
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 8.2e-18 93.6 82 54.9
EL10Ac2g03100 Beta vulgaris HOM05D004709 ORTHO05D005669 1.1e-17 93.2 85 51.8
AUR62018162 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.1e-17 93.2 82 52.4
AUR62042435 Chenopodium quinoa HOM05D004709 ORTHO05D005669 1.1e-17 93.2 82 52.4
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 1.1e-17 93.2 81 58.0
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 1.4e-17 92.8 81 56.8
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 2.4e-17 92.0 82 56.1
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 2.4e-17 92.0 83 54.2
RcHm_v2.0_Chr2g0166371 Rosa chinensis HOM05D004709 ORTHO05D005669 2.4e-17 92.0 84 52.4
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 3.1e-17 91.7 82 54.9
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 3.1e-17 91.7 82 54.9
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 3.1e-17 91.7 79 55.7
Cfa019297 Carpinus fangiana HOM05D004709 ORTHO05D005669 4.1e-17 91.3 82 54.9
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 4.1e-17 91.3 81 56.8
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 4.1e-17 91.3 78 57.7
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 4.1e-17 91.3 81 54.3
Zm00001eb398330 Zea mays HOM05D004709 ORTHO05D005669 4.1e-17 91.3 85 55.3
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 5.3e-17 90.9 81 56.8
MD00G1156500 Malus domestica HOM05D004709 ORTHO05D005669 5.3e-17 90.9 83 49.4
BraA10t43343Z Brassica rapa HOM05D004709 ORTHO05D005669 6.9e-17 90.5 63 74.6
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 6.9e-17 90.5 81 55.6
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 6.9e-17 90.5 85 54.1
FvH4_6g47340 Fragaria vesca HOM05D004709 ORTHO05D005669 9.0e-17 90.1 83 51.8
FAN14G4554 Fragaria x ananassa HOM05D004709 ORTHO05D005669 9.0e-17 90.1 83 51.8
Lsat_1_v5_gn_1_13721 Lactuca sativa HOM05D004709 ORTHO05D005669 9.0e-17 90.1 82 53.7
Eucgr.B00568 Eucalyptus grandis HOM05D004709 ORTHO05D005669 1.2e-16 89.7 83 53.0
Nn3g17388 Nelumbo nucifera HOM05D004709 ORTHO05D005669 1.2e-16 89.7 82 51.2
Psat3g200920 Pisum sativum HOM05D004709 ORTHO05D005669 1.5e-16 89.4 83 51.8
FAN09G0998 Fragaria x ananassa HOM05D004709 ORTHO05D005669 4.5e-16 87.8 83 51.8
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 4.5e-16 87.8 85 52.9
Medtr0287s0050 Medicago truncatula HOM05D004709 ORTHO05D005669 5.9e-16 87.4 82 50.0
Medtr7g012870 Medicago truncatula HOM05D004709 ORTHO05D005669 5.9e-16 87.4 82 50.0
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 7.7e-16 87.0 85 52.9
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 1.3e-15 86.3 82 48.8
BcaC07g40820 Brassica carinata HOM05D004709 ORTHO05D005669 2.2e-15 85.5 50 86.0
C08p38130 Brassica napus HOM05D004709 ORTHO05D005669 2.2e-15 85.5 50 86.0
BolC8t51388H Brassica oleracea HOM05D004709 ORTHO05D005669 2.2e-15 85.5 50 86.0
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 2.2e-15 85.5 76 57.9
AUR62021597 Chenopodium quinoa HOM05D004709 ORTHO05D005669 2.9e-15 85.1 86 51.2
FAN05G1711 Fragaria x ananassa HOM05D004709 ORTHO05D005669 2.9e-15 85.1 83 49.4
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 2.9e-15 85.1 77 50.6
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 2.9e-15 85.1 79 51.9
Prupe.5G200900 Prunus persica HOM05D004709 ORTHO05D005669 3.8e-15 84.7 80 51.2
Rhsim12G0152500 Rhododendron simsii HOM05D004709 ORTHO05D005669 3.8e-15 84.7 76 53.9
Ca_06818_v3 Cicer arietinum L. HOM05D004709 ORTHO05D005669 5.0e-15 84.3 80 48.8
FAN02G1874 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.1e-14 83.2 83 49.4
Dinv38784 Davidia involucrata HOM05D004709 ORTHO05D005669 1.4e-14 82.8 62 59.7
Lj1g0000800 Lotus japonicus HOM05D004709 ORTHO05D005669 1.4e-14 82.8 83 49.4
HanXRQChr17g0545301 Helianthus annuus HOM05D004709 ORTHO05D005669 5.5e-14 80.9 83 49.4
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 7.2e-14 80.5 62 62.9
Sc04g0003050 Simmondsia chinensis HOM05D004709 ORTHO05D005669 9.4e-14 80.1 83 44.6
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 4.6e-13 77.8 86 51.2
Actinidia04845 Actinidia chinensis HOM05D004709 ORTHO05D005669 6.1e-13 77.4 59 61.0
GSVIVG01007919001 Vitis vinifera HOM05D004709 ORTHO05D005669 7.9e-13 77.0 67 52.2
Actinidia09247 Actinidia chinensis HOM05D004709 ORTHO05D005669 1.0e-12 76.6 63 58.7
Dinv10689 Davidia involucrata HOM05D004709 ORTHO05D005669 1.0e-12 76.6 74 50.0
MD08G1088600 Malus domestica HOM05D004709 ORTHO05D005669 1.0e-12 76.6 81 44.4
Mapoly0030s0074 Marchantia polymorpha HOM05D004709 ORTHO05D005669 1.0e-12 76.6 82 41.5
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 6.7e-12 73.9 80 45.0
SMO174G0212 Selaginella moellendorffii HOM05D004709 ORTHO05D005669 3.3e-11 71.6 86 47.7
Sabra09G0061800 Salix brachista HOM05D004709 ORTHO05D005669 5.7e-11 70.9 55 58.2
Atru.chr9.371 Acer truncatum HOM05D004709 ORTHO05D005669 2.8e-10 68.6 82 45.1
Pp3c9_6850 Physcomitrium patens HOM05D004709 ORTHO05D005669 6.3e-10 67.4 80 42.5
Medtr7g083770 Medicago truncatula HOM05D004709 ORTHO05D005669 1.8e-09 65.9 73 43.8
CSS0011072 Camellia sinensis var. sinensis HOM05D004709 ORTHO05D005669 1.2e-08 63.2 60 50.0
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 2.2e-07 58.9 58 50.0
unitig_37.g12784 Utricularia gibba HOM05D004709 ORTHO05D005669 6.5e-07 57.4 67 44.8
PRCOL_00002203 Prasinoderma coloniale HOM05D004709 ORTHO05D005669 1.1e-06 56.6 72 45.8


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