Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 4.9e-111 404.4 199 100.0
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 2.8e-98 362.1 195 90.3
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 4.8e-98 361.3 199 88.4
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 1.4e-97 359.8 199 87.9
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 1.4e-97 359.8 199 87.9
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 1.4e-97 359.8 195 89.7
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 4.0e-97 358.2 199 87.4
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 5.3e-97 357.8 199 87.9
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 1.5e-91 339.7 195 85.6
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 3.6e-90 335.1 198 85.4
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 5.3e-89 331.3 197 84.8
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 1.1e-86 323.6 194 84.0
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 3.2e-86 322.0 199 78.9
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 2.1e-85 319.3 198 81.3
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 7.4e-83 310.8 202 75.7
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 1.4e-78 296.6 196 76.0
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.8e-76 289.7 197 72.1
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 2.3e-76 289.3 193 72.5
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.3e-76 289.3 196 74.5
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 2.3e-76 289.3 196 74.5
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 6.7e-76 287.7 203 72.4
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 8.7e-76 287.3 196 70.9
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 1.5e-75 286.6 196 74.0
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 9.6e-75 283.9 195 72.8
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 3.1e-73 278.9 192 72.9
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 6.9e-73 277.7 196 69.9
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 6.9e-73 277.7 187 71.7
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 6.9e-73 277.7 198 70.2
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 9.0e-73 277.3 199 70.9
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 7.6e-72 274.2 193 69.9
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.7e-71 273.1 193 68.9
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.9e-70 269.6 199 67.8
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 1.9e-70 269.6 195 69.2
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.9e-70 269.6 195 69.2
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.5e-70 269.2 193 71.0
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 3.2e-70 268.9 190 69.5
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 5.5e-70 268.1 198 67.7
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 5.5e-70 268.1 200 66.5
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 9.3e-70 267.3 191 67.5
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.2e-69 266.9 194 66.5
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 1.2e-69 266.9 200 66.0
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.6e-69 266.5 193 69.4
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 2.7e-69 265.8 179 72.1
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.7e-69 265.8 189 68.3
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.0e-68 263.8 193 69.4
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.0e-68 263.8 189 68.8
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.3e-68 263.5 198 66.7
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 1.3e-68 263.5 191 69.6
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 2.3e-68 262.7 182 70.3
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 3.0e-68 262.3 192 67.7
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 3.0e-68 262.3 193 67.4
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 3.0e-68 262.3 197 66.0
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 3.9e-68 261.9 194 67.0
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 5.1e-68 261.5 193 66.8
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 6.7e-68 261.2 189 69.8
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 6.7e-68 261.2 194 67.5
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 8.7e-68 260.8 191 69.1
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 3.3e-67 258.8 198 64.6
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 3.3e-67 258.8 188 69.1
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 4.3e-67 258.5 196 62.8
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 5.7e-67 258.1 191 67.0
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 1.6e-66 256.5 192 66.1
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.6e-66 256.5 194 67.0
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 1.6e-66 256.5 194 66.5
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 2.8e-66 255.8 202 64.9
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 2.8e-66 255.8 193 66.3
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 4.8e-66 255.0 181 69.1
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.8e-65 253.1 176 72.2
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 2.4e-65 252.7 193 66.3
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 1.5e-64 250.0 167 71.9
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.5e-64 250.0 190 64.7
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 5.9e-64 248.1 186 63.4
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 5.9e-64 248.1 167 71.3
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 1.0e-63 247.3 191 63.9
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.0e-63 247.3 191 63.9
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 1.7e-63 246.5 179 68.2
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.7e-63 246.5 199 61.8
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 5.5e-62 241.5 169 71.6
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 5.5e-62 241.5 188 64.4
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.1e-61 239.6 194 61.9
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 4.6e-61 238.4 192 64.1
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 7.9e-61 237.7 198 62.1
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 8.8e-60 234.2 199 60.3
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.2e-56 223.8 175 61.7
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 8.5e-55 217.6 185 58.9
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 8.5e-55 217.6 195 56.9
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 5.5e-54 214.9 191 55.5
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 7.9e-53 211.1 189 57.1
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 3.0e-52 209.1 188 56.9
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 5.3e-49 198.4 149 67.1
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 7.0e-49 198.0 196 56.1
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 9.4e-46 187.6 188 53.7
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 2.1e-45 186.4 189 50.8
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 2.3e-44 183.0 198 49.0
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 7.5e-43 177.9 165 57.6
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 2.0e-32 143.3 93 74.2
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 1.9e-30 136.7 112 61.6
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 7.2e-30 134.8 72 86.1
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 9.5e-30 134.4 78 80.8
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 9.5e-30 134.4 78 80.8
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 2.1e-29 133.3 88 70.5
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 3.0e-28 129.4 83 74.7
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 7.5e-27 124.8 77 75.3
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 2.3e-23 113.2 81 66.7
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.1e-17 94.4 92 52.2
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 3.2e-17 92.8 91 50.5
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 3.2e-17 92.8 162 40.1
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 1.5e-11 73.9 168 30.4
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 5.8e-11 72.0 185 28.6
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.3e-10 70.9 171 29.8
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 3.7e-10 69.3 171 29.2
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 6.4e-10 68.6 180 28.9
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 1.4e-09 67.4 170 27.6
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 2.4e-09 66.6 178 28.1
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.4e-09 66.6 174 29.3
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 2.4e-09 66.6 171 29.2
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 3.2e-09 66.2 174 28.2
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 3.2e-09 66.2 171 28.7
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 4.1e-09 65.9 170 27.6
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 4.1e-09 65.9 166 28.9
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 7.0e-09 65.1 174 27.0
MCO13G030 Micromonas commoda HOM05D006499 ORTHO05D007874 9.2e-09 64.7 179 27.4
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 1.6e-08 63.9 174 29.3
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 2.0e-08 63.5 186 27.4
Pp3s30_567 Physcomitrium patens HOM05D006499 ORTHO05D007874 2.7e-08 63.2 135 34.8
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 2.7e-08 63.2 198 27.8
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 4.6e-08 62.4 139 28.8
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 6.0e-08 62.0 149 28.9
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 7.8e-08 61.6 173 27.7
Nn6g33750 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.0e-07 61.2 50 58.0
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 1.0e-07 61.2 174 28.2
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.0e-07 61.2 174 27.6
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 1.3e-07 60.8 174 27.6
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 1.7e-07 60.5 179 30.2
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 2.3e-07 60.1 172 28.5
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 2.3e-07 60.1 148 26.4
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 2.3e-07 60.1 187 26.7
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 3.9e-07 59.3 174 27.6
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 3.9e-07 59.3 175 26.9
Pp3s30_680 Physcomitrium patens HOM05D006499 ORTHO05D007874 3.9e-07 59.3 143 30.1
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 5.0e-07 58.9 189 27.0
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 6.6e-07 58.5 190 27.4
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 8.6e-07 58.2 189 26.5
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 8.6e-07 58.2 189 26.5
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 1.1e-06 57.8 176 27.3
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 1.1e-06 57.8 147 25.2
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 1.1e-06 57.8 174 26.4
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 1.5e-06 57.4 171 28.1
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 1.5e-06 57.4 199 28.6
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 1.5e-06 57.4 172 25.6
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 1.9e-06 57.0 166 27.1
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 1.9e-06 57.0 171 26.3
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 1.9e-06 57.0 186 26.9
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 1.9e-06 57.0 175 26.9
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 2.5e-06 56.6 173 24.9
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 2.5e-06 56.6 189 28.0
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 4.3e-06 55.8 185 27.0
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 4.3e-06 55.8 184 26.6
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 5.6e-06 55.5 183 26.8
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 5.6e-06 55.5 193 26.4
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 7.3e-06 55.1 183 26.8
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 7.3e-06 55.1 173 25.4
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 7.3e-06 55.1 185 25.9
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 7.3e-06 55.1 176 25.0
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 7.3e-06 55.1 172 27.9
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 9.5e-06 54.7 176 25.0
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 9.5e-06 54.7 171 26.3
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 9.5e-06 54.7 185 27.0
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 9.5e-06 54.7 185 27.0
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 9.5e-06 54.7 169 27.2


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