Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 5.3e-121 439.1 592 100.0
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 5.6e-94 349.4 593 91.7
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.8e-92 344.4 593 91.9
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.8e-92 344.4 592 92.2
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 3.4e-91 340.1 594 91.2
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 4.3e-86 323.2 289 87.5
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 8.3e-82 308.9 291 84.2
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 3.5e-80 303.5 289 85.1
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.7e-79 301.2 291 84.9
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 2.8e-77 293.9 289 83.4
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 4.9e-58 229.9 160 73.8
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 6.0e-56 223.0 316 63.9
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 5.3e-52 209.9 316 68.0
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 2.2e-29 134.8 298 53.7
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 4.8e-29 133.7 299 59.5
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 1.4e-28 132.1 301 55.1
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 3.1e-28 131.0 306 55.6
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 4.1e-28 130.6 296 54.7
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.5e-27 128.6 301 55.8
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 4.5e-27 127.1 311 55.6
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 5.9e-27 126.7 306 55.9
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.3e-26 125.6 294 57.1
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 8.5e-26 122.9 305 55.1
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 8.5e-26 122.9 308 54.9
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.4e-25 122.1 304 52.0
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 7.2e-25 119.8 308 54.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.1e-22 112.5 304 52.6
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 2.0e-22 111.7 303 53.1
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 5.7e-22 110.2 304 52.6
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 9.7e-22 109.4 229 62.9
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.3e-21 109.0 174 39.1
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 2.8e-21 107.8 295 51.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 4.8e-21 107.1 300 52.3
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 1.4e-20 105.5 232 63.4
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.4e-20 104.8 299 52.5
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 1.5e-19 102.1 308 50.0
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 3.4e-19 100.9 303 52.8
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 4.5e-19 100.5 299 51.2
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 5.9e-19 100.1 237 62.0
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 5.9e-19 100.1 296 51.4
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 5.9e-19 100.1 303 52.8
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 7.7e-19 99.8 309 48.9
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 1.0e-18 99.4 238 58.8
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 1.0e-18 99.4 296 49.3
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.7e-18 98.6 237 62.0
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-17 95.9 302 50.7
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.1e-17 95.9 163 36.2
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.4e-17 95.5 222 64.0
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 5.5e-17 93.6 288 51.0
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 1.2e-16 92.4 303 49.8
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 2.7e-16 91.3 299 52.5
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.4e-15 89.0 291 51.9
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 2.6e-14 84.7 288 51.7
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 3.3e-14 84.3 280 51.8
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 3.3e-14 84.3 291 51.5
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 7.4e-14 83.2 303 43.6
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.7e-13 82.0 212 55.2
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 1.7e-13 82.0 175 30.9
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 2.8e-13 81.3 301 47.8
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 4.8e-13 80.5 164 37.8
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 6.3e-13 80.1 291 50.9
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.1e-12 79.3 144 35.4
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.4e-12 79.0 287 54.4
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.4e-12 79.0 232 56.9
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 1.4e-12 79.0 227 57.3
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 4.1e-12 77.4 230 59.6
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 1.2e-11 75.9 225 59.1
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.6e-11 75.5 94 41.5
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.6e-11 74.7 234 58.1
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 3.5e-11 74.3 200 65.0
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 3.5e-11 74.3 167 31.1
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 3.5e-11 74.3 308 36.0
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 7.7e-11 73.2 266 47.7
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 7.7e-11 73.2 152 31.6
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.0e-10 72.8 263 45.2
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.0e-10 72.8 289 49.5
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 2.2e-10 71.6 151 33.8
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 2.9e-10 71.2 168 72.0
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.1e-09 69.3 222 50.5
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 1.9e-09 68.6 167 68.3
BcaB02g09816 Brassica carinata HOM05D000880 ORTHO05D009684 4.2e-09 67.4 41 82.9
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 7.2e-09 66.6 289 50.5
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 2.1e-08 65.1 93 38.7
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 6.1e-08 63.5 209 61.7
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 5.2e-07 60.5 91 37.4
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 6.7e-07 60.1 173 27.7
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 2.6e-06 58.2 179 54.2
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 3.3e-06 57.8 146 28.8
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 4.4e-06 57.4 152 32.2


User provided reference genes

Program Settings