Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 3.8e-309 1063.9 514 100.0
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 8.9e-282 973.0 504 92.1
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 8.9e-282 973.0 504 92.1
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 2.0e-281 971.8 504 92.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.8e-281 970.3 504 92.3
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 5.8e-281 970.3 504 91.9
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.0e-273 945.3 551 84.9
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 9.9e-273 943.0 495 91.1
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.1e-260 902.9 504 85.3
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.7e-254 881.7 488 87.7
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 9.0e-234 813.5 524 76.1
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.4e-221 773.1 509 71.1
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.7e-216 756.1 379 94.7
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.6e-214 749.6 503 70.0
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.1e-214 749.2 506 70.6
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 6.1e-214 747.7 483 71.8
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 6.1e-214 747.7 483 71.8
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.0e-213 746.9 499 70.3
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.3e-213 745.7 503 69.8
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 6.7e-213 744.2 505 69.3
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 7.4e-212 740.7 502 69.7
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 9.7e-212 740.3 509 69.0
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 9.7e-212 740.3 504 70.2
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.7e-211 739.6 500 70.2
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.2e-211 739.2 510 69.2
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.8e-211 738.8 507 68.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 4.8e-211 738.0 504 69.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.1e-210 735.3 502 70.3
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 4.1e-210 734.9 502 68.3
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 5.3e-210 734.6 484 71.3
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 5.3e-210 734.6 512 68.6
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 5.3e-210 734.6 502 68.9
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 5.3e-210 734.6 499 69.9
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 7.0e-210 734.2 504 67.9
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 9.1e-210 733.8 498 70.1
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 7.7e-209 730.7 500 68.8
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-208 729.9 488 70.1
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.3e-208 729.9 502 69.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 2.9e-208 728.8 501 68.1
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 5.0e-208 728.0 503 68.6
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 5.0e-208 728.0 506 68.4
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 1.1e-207 726.9 483 69.8
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 1.5e-207 726.5 483 70.8
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 3.2e-207 725.3 513 68.0
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.6e-206 723.0 511 66.5
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.1e-206 722.6 487 70.8
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 8.0e-206 720.7 481 68.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.0e-205 720.3 496 69.0
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.0e-205 720.3 507 67.7
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 1.2e-204 716.8 483 69.8
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.5e-204 716.5 504 67.1
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 9.7e-204 713.8 508 66.5
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.7e-203 713.0 548 62.4
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 3.7e-203 711.8 504 66.3
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.8e-203 711.4 508 66.3
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.1e-202 710.3 508 67.5
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.4e-202 709.9 518 64.5
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.4e-202 709.9 481 68.4
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.4e-202 709.9 507 66.7
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 2.4e-202 709.1 486 67.7
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.1e-202 708.4 508 67.3
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 2.0e-201 706.1 486 67.7
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 2.7e-201 705.7 507 66.7
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 4.5e-201 704.9 482 67.4
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.0e-200 703.7 508 65.0
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.3e-200 703.4 501 67.5
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 3.8e-200 701.8 486 67.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 6.5e-200 701.0 479 67.8
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 8.5e-200 700.7 483 67.7
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.5e-200 700.7 508 64.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 4.2e-199 698.4 487 66.9
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.2e-198 696.8 371 88.4
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.1e-198 696.0 499 64.7
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.1e-198 696.0 494 67.0
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.6e-198 695.3 467 70.2
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.0e-197 693.7 508 65.6
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 4.4e-196 688.3 489 65.8
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 5.7e-196 688.0 464 69.6
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 5.7e-196 688.0 495 65.5
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.7e-195 686.4 508 64.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 6.3e-195 684.5 508 64.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.6e-193 679.9 482 66.8
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.5e-193 678.3 476 67.2
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.0e-192 677.2 512 63.3
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.0e-192 677.2 507 64.5
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 3.8e-192 675.2 483 65.6
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 4.2e-191 671.8 448 69.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 5.5e-191 671.4 452 70.1
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 6.1e-190 667.9 486 65.4
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.3e-187 660.2 508 63.2
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 3.7e-187 658.7 480 64.0
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 4.9e-187 658.3 478 63.4
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.0e-184 650.6 495 62.6
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.3e-181 639.4 454 67.4
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 8.9e-181 637.5 501 61.7
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.0e-176 621.7 502 61.4
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 8.3e-163 577.8 479 59.3
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.7e-160 570.1 517 52.8
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 7.6e-140 501.5 340 69.4
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 9.9e-140 501.1 341 69.5
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.3e-125 452.2 357 59.4
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.7e-112 408.7 314 61.5
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-111 406.8 308 63.0
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 6.3e-110 402.1 496 46.2
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 7.2e-90 335.5 234 61.5
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.5e-79 301.2 214 59.8
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 3.5e-68 263.5 184 67.4
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.2e-65 255.0 172 68.0
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 8.3e-54 215.7 148 62.8
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 3.5e-52 210.3 141 70.2
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 5.1e-19 100.1 104 51.9
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.6e-12 78.6 53 58.5
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.7e-12 77.8 91 46.2
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 2.5e-10 71.2 124 37.1


User provided reference genes

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