Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.1e-192 676.4 314 100.0
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 5.4e-80 302.0 158 86.7
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 3.0e-78 296.2 158 84.8
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 3.0e-78 296.2 158 84.8
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 5.1e-78 295.4 158 85.4
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 1.9e-77 293.5 158 84.8
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 6.2e-76 288.5 158 80.4
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.4e-74 282.7 163 82.2
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.9e-72 276.9 161 80.1
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 1.9e-72 276.9 138 89.9
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 1.9e-72 276.9 138 89.9
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 2.4e-72 276.6 157 79.0
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 3.5e-71 272.7 157 78.3
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 3.5e-71 272.7 157 78.3
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 3.5e-71 272.7 157 78.3
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 4.6e-71 272.3 157 79.0
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 6.0e-71 271.9 138 88.4
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 6.0e-71 271.9 140 85.0
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.0e-70 271.2 138 87.7
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.3e-70 270.8 161 78.3
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 3.9e-70 269.2 157 78.3
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 3.3e-69 266.2 144 81.2
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 3.6e-68 262.7 138 84.8
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 1.4e-67 260.8 160 75.0
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 2.4e-67 260.0 138 80.4
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 8.9e-67 258.1 138 81.2
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 8.9e-67 258.1 158 74.7
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 7.6e-66 255.0 138 81.2
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 1.1e-64 251.1 138 81.2
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 1.1e-61 241.1 146 72.6
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.6e-60 236.1 154 66.9
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 1.9e-53 213.8 154 60.4
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 3.2e-48 196.4 163 56.4
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 7.1e-48 195.3 144 63.2
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 1.6e-47 194.1 115 76.5
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 3.3e-45 186.4 116 75.0
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 2.4e-35 153.7 141 49.6
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.6e-28 131.0 150 44.0
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 2.6e-26 123.6 148 39.2
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 2.6e-26 123.6 148 39.2
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 2.6e-26 123.6 79 68.4
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 1.7e-25 120.9 148 37.8
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 2.9e-25 120.2 148 37.8
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 6.5e-25 119.0 148 37.2
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 8.5e-25 118.6 144 45.1
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 4.2e-24 116.3 149 37.6
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 6.1e-23 112.5 149 38.9
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.3e-22 110.5 153 35.9
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 8.8e-22 108.6 149 36.9
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 2.0e-21 107.5 149 36.2
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 2.6e-21 107.1 149 37.6
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 3.3e-21 106.7 149 34.9
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 5.7e-21 105.9 149 37.6
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 5.7e-21 105.9 155 36.1
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 7.4e-21 105.5 149 36.2
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 9.7e-21 105.1 149 35.6
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.8e-20 103.6 142 35.9
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 3.7e-20 103.2 149 35.6
Peaxi162Scf00047g01539 Petunia axillaris HOM05D000256 ORTHO05D000119 4.1e-11 73.2 275 25.5
FAN14G0909 Fragaria x ananassa HOM05D000256 ORTHO05D000119 5.5e-08 62.8 263 25.5
CAN.G229.22 Capsicum annuum HOM05D000256 ORTHO05D000119 4.7e-07 59.7 131 30.5
Migut.C00644 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.8e-06 57.8 120 31.7
CAN.G194.33 Capsicum annuum HOM05D000256 ORTHO05D000119 3.0e-06 57.0 112 31.2
CsaV3_5G014260 Cucumis sativus L. HOM05D012637 ORTHO05D015615 4.0e-06 56.6 98 34.7
unitig_899.g15051 Utricularia gibba HOM05D000256 ORTHO05D000119 5.2e-06 56.2 96 29.2
Haze_23914 Corylus avellana HOM05D013890 ORTHO05D016266 6.7e-06 55.8 303 25.7
Peaxi162Scf00047g01510 Petunia axillaris HOM05D000256 ORTHO05D000119 8.8e-06 55.5 271 22.5


User provided reference genes

Program Settings