Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 1.2e-152 543.1 264 100.0
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.9e-126 456.1 262 84.4
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 4.2e-126 454.9 261 84.3
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.5e-123 446.4 261 83.9
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 3.9e-116 421.8 261 77.0
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 1.7e-114 416.4 231 83.5
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 1.0e-95 354.0 234 69.7
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 6.8e-84 314.7 172 86.6
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 1.2e-83 313.9 172 86.0
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 2.6e-83 312.8 172 86.0
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 2.6e-83 312.8 172 86.0
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 3.4e-83 312.4 172 85.5
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 2.2e-82 309.7 173 86.7
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 3.1e-81 305.8 172 84.3
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 2.5e-78 296.2 163 83.4
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 5.6e-78 295.0 173 83.8
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 3.0e-76 289.3 162 84.6
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 1.2e-75 287.3 168 78.6
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 8.0e-69 264.6 151 81.5
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 9.2e-65 251.1 152 70.4
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 8.6e-55 218.0 158 60.8
BcaB04g19750 Brassica carinata HOM05D011096 ORTHO05D013679 9.0e-36 154.8 92 87.0
BcaC04g23601 Brassica carinata HOM05D011096 ORTHO05D013679 3.2e-33 146.4 145 58.6
AL5G44710 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 1.0e-31 141.4 139 54.0
CARHR187370 Cardamine hirsuta HOM05D011096 ORTHO05D013679 4.3e-30 136.0 93 74.2
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 2.8e-29 133.3 156 44.2
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 6.2e-29 132.1 135 48.1
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 8.1e-29 131.7 156 43.6
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 8.1e-29 131.7 156 43.6
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 8.1e-29 131.7 156 42.9
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 1.4e-28 131.0 156 43.6
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 3.1e-28 129.8 156 43.6
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 4.0e-28 129.4 156 42.9
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 6.9e-28 128.6 135 45.9
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 9.0e-28 128.3 135 46.7
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 9.0e-28 128.3 135 46.7
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 9.0e-28 128.3 135 46.7
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-27 127.9 135 45.9
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 2.6e-27 126.7 135 45.9
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 3.4e-27 126.3 143 42.0
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 7.1e-25 118.6 156 39.7
CARHR152950 Cardamine hirsuta HOM05D011096 ORTHO05D013679 1.2e-24 117.9 92 60.9
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 2.7e-24 116.7 359 29.5
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 2.7e-24 116.7 136 43.4
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 3.5e-24 116.3 135 45.2
Carub.0005s0989 Capsella rubella HOM05D011096 ORTHO05D013679 1.8e-23 114.0 92 59.8
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 3.0e-23 113.2 135 42.2
Sp5g17170 Schrenkiella parvula HOM05D011096 ORTHO05D013679 3.0e-23 113.2 92 60.9
AT3G44170 Arabidopsis thaliana HOM05D011096 ORTHO05D013679 8.7e-23 111.7 92 58.7
Thhalv10011134m.g Eutrema salsugineum HOM05D011096 ORTHO05D013679 8.7e-23 111.7 92 57.6
BcaC01g02072 Brassica carinata HOM05D011096 ORTHO05D013679 1.1e-22 111.3 93 61.3
C03p68880 Brassica napus HOM05D011096 ORTHO05D013679 1.1e-22 111.3 93 61.3
BolC3t19143H Brassica oleracea HOM05D011096 ORTHO05D013679 1.1e-22 111.3 93 61.3
BraA06t25305Z Brassica rapa HOM05D011096 ORTHO05D013679 1.9e-22 110.5 93 61.3
A06p22140 Brassica napus HOM05D011096 ORTHO05D013679 2.5e-22 110.2 93 61.3
Aa31LG4G13400 Aethionema arabicum HOM05D011096 ORTHO05D013679 1.3e-21 107.8 121 47.1
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 1.2e-11 74.7 158 31.6
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 3.4e-11 73.2 165 31.5
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 4.5e-11 72.8 145 35.2
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 2.9e-10 70.1 158 32.9
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 3.8e-10 69.7 148 35.1
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 6.5e-10 68.9 158 32.3
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 1.1e-09 68.2 156 30.1
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 1.1e-09 68.2 134 32.8
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.4e-09 67.8 165 30.3
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 1.4e-09 67.8 165 30.3
AL5G22200 Arabidopsis lyrata HOM05D011096 ORTHO05D013679 1.9e-09 67.4 43 67.4
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 3.2e-09 66.6 166 30.7
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 1.0e-07 61.6 161 31.1
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 1.3e-07 61.2 141 30.5
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 2.3e-07 60.5 163 31.3
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 3.9e-07 59.7 162 27.2
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 3.9e-07 59.7 149 31.5
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 5.1e-07 59.3 126 31.7
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 5.1e-07 59.3 141 29.1
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 5.1e-07 59.3 141 29.1
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 5.1e-07 59.3 149 29.5
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 6.7e-07 58.9 141 28.4
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 6.7e-07 58.9 141 28.4
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 8.7e-07 58.5 141 28.4
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 2.5e-06 57.0 88 38.6
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 2.5e-06 57.0 87 37.9


User provided reference genes

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