Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21610 Schrenkiella parvula HOM05D002043 ORTHO05D009749 4.8e-93 344.7 207 100.0
Thhalv10005284m.g Eutrema salsugineum HOM05D002043 ORTHO05D009749 1.2e-64 250.4 215 72.1
AL6G38110 Arabidopsis lyrata HOM05D002043 ORTHO05D002207 2.8e-61 239.2 214 71.0
Carub.0006s2389 Capsella rubella HOM05D002043 ORTHO05D009749 2.9e-58 229.2 214 65.9
CARHR187400 Cardamine hirsuta HOM05D002043 ORTHO05D009749 4.7e-56 221.9 221 63.3
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 1.2e-38 164.1 214 52.3
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 1.5e-17 94.0 222 36.9
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 3.8e-13 79.3 142 41.5
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 2.4e-12 76.6 212 31.1
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 3.2e-12 76.3 205 31.7
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 9.2e-12 74.7 214 30.4
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.7e-10 70.5 211 32.2
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 3.0e-10 69.7 203 33.5
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 3.0e-10 69.7 200 30.0
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 3.9e-10 69.3 205 29.8
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 5.1e-10 68.9 201 30.8
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 5.1e-10 68.9 212 42.0
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.9e-09 67.0 141 36.9
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.5e-09 66.6 128 39.1
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 5.6e-09 65.5 214 28.5
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 2.8e-08 63.2 195 33.3
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 3.6e-08 62.8 205 29.8
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 8.1e-08 61.6 214 29.0
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 8.1e-08 61.6 146 32.2
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 1.8e-07 60.5 124 36.3
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.8e-07 60.5 195 31.8
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.8e-07 60.5 206 29.6
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 1.8e-07 60.5 238 33.6
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 2.4e-07 60.1 214 26.6
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.1e-07 59.7 131 35.1
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 4.0e-07 59.3 129 34.9
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 5.3e-07 58.9 217 26.3
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 6.9e-07 58.5 220 26.4
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 6.9e-07 58.5 229 27.9
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 1.2e-06 57.8 206 29.1
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 1.2e-06 57.8 126 35.7
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 3.4e-06 56.2 194 31.4
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 3.4e-06 56.2 222 29.7
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 4.4e-06 55.8 130 36.9
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.8e-06 55.5 201 30.3
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 7.6e-06 55.1 225 27.1
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 9.9e-06 54.7 193 26.4
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 9.9e-06 54.7 133 34.6


User provided reference genes

Program Settings