Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21360 Schrenkiella parvula HOM05D008255 ORTHO05D011943 1.5e-64 249.6 144 100.0
Thhalv10005106m.g Eutrema salsugineum HOM05D008255 ORTHO05D011943 1.1e-46 190.3 143 71.3
BcaNung03958 Brassica carinata HOM05D008255 ORTHO05D011943 4.0e-38 161.8 145 68.3
CARHR186950 Cardamine hirsuta HOM05D008255 ORTHO05D011943 4.3e-32 141.7 148 59.5
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 5.6e-32 141.4 148 60.1
BcaNung02826 Brassica carinata HOM05D008255 ORTHO05D011943 6.2e-31 137.9 149 59.1
BolC7t44700H Brassica oleracea HOM05D008255 ORTHO05D011943 6.2e-31 137.9 149 59.1
AT5G26720 Arabidopsis thaliana HOM05D008255 ORTHO05D011943 1.2e-29 133.7 147 57.1
A06p36840 Brassica napus HOM05D008255 ORTHO05D011943 9.9e-29 130.6 145 55.2
BraA06t26610Z Brassica rapa HOM05D008255 ORTHO05D011943 2.9e-28 129.0 146 53.4
BcaB07g29964 Brassica carinata HOM05D008255 ORTHO05D011943 1.1e-27 127.1 144 52.8
C02p59110 Brassica napus HOM05D008255 ORTHO05D011943 2.5e-24 115.9 144 54.2
AL6G38460 Arabidopsis lyrata HOM05D008255 ORTHO05D011943 4.3e-24 115.2 152 52.0
BcaNung03956 Brassica carinata HOM05D008255 ORTHO05D011943 2.4e-22 109.4 96 67.7
BcaC03g17871 Brassica carinata HOM05D008255 ORTHO05D011943 4.4e-21 105.1 148 51.4
BolC2t11966H Brassica oleracea HOM05D008255 ORTHO05D011943 4.4e-21 105.1 149 51.7
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 1.4e-19 100.1 142 50.7
A02p39380 Brassica napus HOM05D008255 ORTHO05D011943 1.2e-18 97.1 144 50.0
BraA02t08903Z Brassica rapa HOM05D008255 ORTHO05D011943 6.0e-18 94.7 144 44.4
THA.LOC104802769 Tarenaya hassleriana HOM05D008255 ORTHO05D011943 2.5e-16 89.4 108 50.9
Carub.0006s2424 Capsella rubella HOM05D008255 ORTHO05D011943 2.4e-14 82.8 139 48.2
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 1.3e-09 67.0 111 37.8
CARHR080400 Cardamine hirsuta HOM05D024382 ORTHO05D011943 2.5e-08 62.8 93 43.0
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 5.6e-08 61.6 111 35.1
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.8e-07 59.3 101 36.6
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 4.8e-07 58.5 52 55.8
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 8.1e-07 57.8 58 48.3
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 8.1e-07 57.8 59 50.8
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 8.1e-07 57.8 59 50.8
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 1.1e-06 57.4 58 51.7
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.4e-06 57.0 56 53.6
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.4e-06 57.0 50 54.0
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.8e-06 56.6 96 38.5
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 1.8e-06 56.6 86 40.7
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 2.4e-06 56.2 57 50.9
AL3G16700 Arabidopsis lyrata HOM05D024382 ORTHO05D011943 3.1e-06 55.8 93 39.8
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 4.0e-06 55.5 57 50.9
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 4.0e-06 55.5 114 34.2
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 5.3e-06 55.1 58 53.4
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 6.9e-06 54.7 55 50.9
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 6.9e-06 54.7 97 38.1
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 9.0e-06 54.3 55 49.1


User provided reference genes

Program Settings