Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 9.4e-114 414.1 302 100.0
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 8.5e-107 391.0 302 84.8
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 3.6e-105 385.6 302 83.1
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 6.3e-102 374.8 330 76.4
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 1.2e-97 360.5 303 81.2
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 1.5e-95 353.6 302 74.2
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 1.5e-95 353.6 302 74.2
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 5.4e-93 345.1 275 95.6
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 5.9e-92 341.7 302 81.1
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 1.3e-91 340.5 302 75.5
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 1.3e-91 340.5 302 75.5
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 1.3e-91 340.5 302 75.5
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 7.2e-90 334.7 362 75.4
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 7.7e-84 314.7 303 74.6
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 4.1e-69 265.8 303 65.3
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 7.0e-69 265.0 302 64.6
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 7.8e-68 261.5 304 60.5
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 2.3e-67 260.0 302 59.3
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 3.9e-67 259.2 304 66.8
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 5.0e-67 258.8 307 60.6
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 5.0e-67 258.8 303 57.8
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 6.6e-67 258.5 302 54.0
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 1.1e-66 257.7 303 57.8
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.9e-66 256.9 289 53.3
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 5.6e-66 255.4 303 61.1
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 3.6e-65 252.7 305 59.0
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 3.6e-65 252.7 316 55.7
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 4.7e-65 252.3 290 52.1
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 1.1e-64 251.1 317 59.3
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 3.1e-64 249.6 310 59.4
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 3.1e-64 249.6 302 52.6
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 5.2e-64 248.8 275 62.5
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 8.9e-64 248.1 307 58.3
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 1.2e-63 247.7 308 62.3
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.5e-63 247.3 277 66.4
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 2.6e-63 246.5 292 60.3
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 5.8e-63 245.4 307 57.0
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 5.8e-63 245.4 302 59.9
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 7.5e-63 245.0 301 48.2
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 7.5e-63 245.0 302 58.9
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 9.8e-63 244.6 306 51.0
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 1.3e-62 244.2 310 52.9
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 1.7e-62 243.8 306 51.6
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 4.9e-62 242.3 276 65.9
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 8.3e-62 241.5 301 53.2
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 1.1e-61 241.1 307 60.9
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 1.9e-61 240.4 308 61.4
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 2.4e-61 240.0 301 54.2
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.4e-61 240.0 308 58.4
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 3.2e-61 239.6 310 54.5
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 3.2e-61 239.6 280 56.1
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 3.2e-61 239.6 302 58.3
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 4.1e-61 239.2 302 71.5
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 4.1e-61 239.2 308 61.0
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 4.1e-61 239.2 308 54.5
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 5.4e-61 238.8 307 53.4
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 5.4e-61 238.8 306 61.4
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 7.1e-61 238.4 303 57.1
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 9.2e-61 238.0 316 47.5
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 1.6e-60 237.3 302 71.2
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 1.6e-60 237.3 292 74.0
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 3.5e-60 236.1 307 51.1
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 6.0e-60 235.3 319 59.6
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.0e-59 234.6 270 49.6
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 6.6e-59 231.9 298 67.1
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 6.6e-59 231.9 310 65.2
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 6.6e-59 231.9 323 58.5
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 8.6e-59 231.5 306 60.8
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 3.3e-58 229.6 302 67.5
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 3.3e-58 229.6 303 63.7
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 3.3e-58 229.6 306 57.8
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 3.3e-58 229.6 302 49.3
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 5.6e-58 228.8 304 47.7
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 4.7e-57 225.7 307 56.0
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 8.1e-57 224.9 296 59.1
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 8.1e-57 224.9 302 57.9
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 1.4e-56 224.2 299 49.8
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 2.3e-56 223.4 250 63.2
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 4.0e-56 222.6 295 64.4
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 2.0e-55 220.3 193 61.1
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 3.4e-55 219.5 312 61.9
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 5.8e-55 218.8 314 61.5
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 7.6e-55 218.4 305 44.3
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 2.2e-54 216.9 289 57.4
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 2.9e-54 216.5 187 61.5
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 4.9e-54 215.7 302 62.6
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 4.9e-54 215.7 303 44.2
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 8.4e-54 214.9 302 65.2
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.1e-53 214.5 307 50.8
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 5.4e-53 212.2 169 64.5
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 1.2e-52 211.1 333 56.8
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 6.0e-52 208.8 341 54.3
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 7.8e-52 208.4 308 62.3
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 1.0e-51 208.0 308 51.3
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 7.3e-50 201.8 304 64.1
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 7.3e-50 201.8 304 64.1
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 7.3e-50 201.8 298 41.6
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.1e-48 198.0 305 60.3
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 3.4e-47 193.0 303 50.2
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 9.9e-47 191.4 311 59.2
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 2.2e-46 190.3 295 63.7
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 3.8e-46 189.5 273 59.0
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 6.4e-46 188.7 311 62.7
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 7.1e-45 185.3 302 55.6
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 2.7e-44 183.3 300 43.0
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 9.6e-42 174.9 228 51.8
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 8.1e-41 171.8 228 45.2
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 2.6e-39 166.8 293 49.1
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 9.3e-37 158.3 189 47.1
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 2.1e-36 157.1 180 51.1
MBI06_g28828_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 2.0e-31 140.6 158 68.4
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 7.9e-28 128.6 120 54.2
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 1.1e-26 124.8 163 68.1
MELO3C015241.2 Cucumis melo HOM05D005826 ORTHO05D004357 1.4e-24 117.9 78 71.8
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 2.4e-24 117.1 178 38.8
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.2e-23 114.8 189 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 7.6e-23 112.1 137 46.7
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 7.6e-23 112.1 118 55.9
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 3.8e-22 109.8 102 57.8
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 3.2e-21 106.7 136 55.9
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 5.7e-18 95.9 55 85.5
PGSC0003DMG400018243 Solanum tuberosum HOM05D005826 ORTHO05D004357 7.6e-15 85.5 130 53.1
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 1.3e-14 84.7 57 71.9
BcaNung03680 Brassica carinata HOM05D005826 ORTHO05D004357 8.4e-14 82.0 46 87.0
C07p41530 Brassica napus HOM05D005826 ORTHO05D004357 1.6e-12 77.8 45 84.4
BolC7t44686H Brassica oleracea HOM05D005826 ORTHO05D004357 1.6e-12 77.8 45 84.4
Os05g0229475 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.6e-12 77.8 48 72.9
Oeu023421.1 Olea europaea HOM05D005826 ORTHO05D004357 3.1e-08 63.5 62 62.9
Migut.O00760 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.2e-07 61.6 58 65.5
Os04g0114801 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 7.7e-07 58.9 57 54.4


User provided reference genes

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