Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g21190 Schrenkiella parvula HOM05D010839 ORTHO05D012555 1.6e-88 329.3 155 100.0
Thhalv10005695m.g Eutrema salsugineum HOM05D010839 ORTHO05D012555 7.5e-67 257.3 159 74.8
AL6G38680 Arabidopsis lyrata HOM05D010839 ORTHO05D012555 2.5e-46 189.1 159 59.1
A02p39010 Brassica napus HOM05D010839 ORTHO05D012555 1.2e-43 180.3 151 58.3
BraA02t08871Z Brassica rapa HOM05D010839 ORTHO05D012555 1.2e-43 180.3 152 59.2
BcaC03g17831 Brassica carinata HOM05D010839 ORTHO05D012555 3.4e-43 178.7 152 59.2
C02p58600 Brassica napus HOM05D010839 ORTHO05D012555 3.4e-43 178.7 152 59.2
BolC2t11921H Brassica oleracea HOM05D010839 ORTHO05D012555 3.4e-43 178.7 152 59.2
Carub.0006s2446 Capsella rubella HOM05D010839 ORTHO05D012555 4.4e-43 178.3 159 57.2
AT5G26805 Arabidopsis thaliana HOM05D010839 ORTHO05D012555 1.3e-42 176.8 159 57.2
CARHR107860 Cardamine hirsuta HOM05D010839 ORTHO05D012555 6.4e-42 174.5 157 56.7
BcaNung06219 Brassica carinata HOM05D010839 ORTHO05D012555 1.4e-41 173.3 151 58.3
CARHR186740 Cardamine hirsuta HOM05D010839 ORTHO05D012555 1.1e-36 157.1 156 52.6
CARHR186730 Cardamine hirsuta HOM05D010839 ORTHO05D012555 9.0e-36 154.1 155 51.6
Aa31LG11G9830 Aethionema arabicum HOM05D010839 ORTHO05D012555 4.5e-27 125.2 162 43.8
THA.LOC104821741 Tarenaya hassleriana HOM05D010839 ORTHO05D012555 1.5e-22 110.2 160 40.6
Aa31LG11G9840 Aethionema arabicum HOM05D010839 ORTHO05D012555 7.4e-22 107.8 137 42.3
Aa31sc443G10 Aethionema arabicum HOM05D010839 ORTHO05D012555 2.8e-21 105.9 162 41.4
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 9.7e-14 80.9 159 34.0
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 8.2e-13 77.8 165 30.3
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 9.0e-12 74.3 160 32.5
Aqoxy4G02501 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 4.5e-11 72.0 160 30.6
CARHR058520 Cardamine hirsuta HOM05D010839 ORTHO05D012555 5.0e-10 68.6 55 65.5
Aqoxy5G03281 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.6e-08 63.5 154 28.6
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 4.6e-08 62.0 128 29.7
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 4.6e-08 62.0 142 30.3
Rhsim13G0098200 Rhododendron simsii HOM05D001713 ORTHO05D001669 4.6e-08 62.0 146 28.1
Aqoxy5G03283 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 6.1e-08 61.6 154 27.9
CiPaw.04G131800 Carya illinoinensis HOM05D001713 ORTHO05D001669 1.4e-07 60.5 133 33.8
CiPaw.04G131900 Carya illinoinensis HOM05D001713 ORTHO05D001669 1.4e-07 60.5 133 34.6
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 2.3e-07 59.7 116 28.4
TAR374G1627 Trochodendron aralioides HOM05D001713 ORTHO05D001669 3.9e-07 58.9 158 30.4
TAR374G0219 Trochodendron aralioides HOM05D001713 ORTHO05D001669 6.7e-07 58.2 116 31.9
Aqoxy5G03280 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.1e-06 57.4 64 39.1
Sabra03G0021400 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0141500 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0141700 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0141900 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0142100 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0142300 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0142500 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0142700 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
Sabra03G0142800 Salix brachista HOM05D001713 ORTHO05D001669 1.1e-06 57.4 67 37.3
TAR374G0415 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.1e-06 57.4 113 28.3
TAR374G1468 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.1e-06 57.4 116 31.9
Eucgr.E02045 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.5e-06 57.0 139 26.6
Rhsim07G0090600 Rhododendron simsii HOM05D001713 ORTHO05D001669 1.5e-06 57.0 137 26.3
Carub.0002s2549 Capsella rubella HOM05D001713 ORTHO05D001669 2.0e-06 56.6 136 28.7
THA.LOC104804530 Tarenaya hassleriana HOM05D013958 ORTHO05D015335 2.0e-06 56.6 120 33.3
QL02p074400 Quercus lobata HOM05D001713 ORTHO05D001669 2.5e-06 56.2 117 27.4
AT2G33720 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 3.3e-06 55.8 117 30.8
Lalb_Chr09g0330831 Lupinus albus HOM05D001713 ORTHO05D001669 3.3e-06 55.8 118 28.8
QL02p102432 Quercus lobata HOM05D001713 ORTHO05D001669 4.3e-06 55.5 104 27.9
QL02p102444 Quercus lobata HOM05D001713 ORTHO05D001669 5.7e-06 55.1 104 27.9
QL02p103065 Quercus lobata HOM05D001713 ORTHO05D001669 5.7e-06 55.1 104 27.9
QL02p103081 Quercus lobata HOM05D001713 ORTHO05D001669 5.7e-06 55.1 104 27.9
Sabra18G0027300 Salix brachista HOM05D001713 ORTHO05D001669 5.7e-06 55.1 67 35.8
Prupe.5G102400 Prunus persica HOM05D001713 ORTHO05D001669 7.4e-06 54.7 126 27.8


User provided reference genes

Program Settings