Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 6.9e-84 313.9 158 100.0
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-54 214.5 158 65.8
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-54 214.5 158 65.8
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-53 213.4 158 65.8
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-53 213.0 160 64.4
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 4.8e-53 211.5 158 65.8
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 4.8e-53 211.5 157 66.2
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 4.8e-53 211.5 158 65.2
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 6.3e-53 211.1 158 65.2
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 8.2e-53 210.7 158 64.6
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 8.2e-53 210.7 158 65.2
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 1.1e-52 210.3 158 65.8
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 1.1e-52 210.3 158 65.8
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 1.4e-52 209.9 158 64.6
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 5.3e-52 208.0 159 67.9
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 9.1e-52 207.2 160 63.1
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 9.1e-52 207.2 160 63.1
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 1.2e-51 206.8 158 65.2
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 1.6e-51 206.5 158 64.6
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 3.5e-51 205.3 158 65.2
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 1.3e-50 203.4 158 63.9
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-49 200.3 158 60.1
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 1.5e-49 199.9 157 62.4
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 1.9e-49 199.5 153 64.1
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 3.2e-49 198.7 157 59.9
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 2.1e-48 196.1 157 59.9
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-46 190.3 156 59.0
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 3.4e-46 188.7 157 61.1
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 3.4e-46 188.7 156 60.3
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 5.7e-46 188.0 152 60.5
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 7.5e-46 187.6 150 61.3
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 7.5e-46 187.6 156 59.6
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 3.1e-44 182.2 154 59.1
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 5.4e-44 181.4 149 60.4
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 5.4e-44 181.4 149 60.4
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-43 179.9 149 59.1
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-43 179.9 149 59.7
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 4.5e-43 178.3 149 59.1
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 7.7e-43 177.6 149 59.7
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-42 176.4 149 59.1
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 3.8e-42 175.3 134 64.9
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 6.5e-42 174.5 139 62.6
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-41 173.7 157 57.3
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 2.1e-40 169.5 149 57.0
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 2.7e-40 169.1 139 61.2
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.3e-37 160.2 156 52.6
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 6.6e-34 147.9 151 51.0
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 5.6e-33 144.8 151 48.3
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.3e-31 139.4 149 46.3
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 9.8e-30 134.0 149 45.6
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.2e-29 132.9 150 45.3
AL4G10990 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 2.9e-29 132.5 149 46.3
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 4.1e-28 128.6 149 44.3
A06p13980 Brassica napus HOM05D007888 ORTHO05D009976 9.2e-28 127.5 111 54.1
AT2G21727 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.7e-27 125.9 150 45.3
Sp4g04710 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.9e-25 119.8 131 48.9
AT3G01185 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 3.3e-25 119.0 144 45.1
AL3G11060 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 7.3e-25 117.9 150 46.0
CARHR112800 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.2e-24 117.1 148 37.8
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-24 116.7 78 70.5
Carub.0003s0096 Capsella rubella HOM05D007888 ORTHO05D009976 1.6e-24 116.7 152 44.7
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 4.7e-24 115.2 156 42.9
BcaB07g29934 Brassica carinata HOM05D007888 ORTHO05D009976 4.7e-24 115.2 158 39.2
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 3.1e-23 112.5 92 59.8
BcaC03g17926 Brassica carinata HOM05D007888 ORTHO05D009976 1.5e-22 110.2 158 39.9
C02p59850 Brassica napus HOM05D007888 ORTHO05D009976 1.5e-22 110.2 158 39.9
BolC2t12043H Brassica oleracea HOM05D007888 ORTHO05D009976 1.5e-22 110.2 158 39.9
A02p39970 Brassica napus HOM05D007888 ORTHO05D009976 1.7e-21 106.7 158 39.2
BraA02t08959Z Brassica rapa HOM05D007888 ORTHO05D009976 1.7e-21 106.7 158 39.2
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 6.4e-21 104.8 152 39.5
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.4e-20 103.6 151 37.7
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 1.4e-20 103.6 148 39.2
BraA06t26681Z Brassica rapa HOM05D007888 ORTHO05D009976 4.6e-19 98.6 96 54.2
Carub.0004s0517 Capsella rubella HOM05D007888 ORTHO05D009976 7.8e-19 97.8 156 36.5
Sp4g04700 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.5e-17 93.6 115 43.5
Carub.0004s0516 Capsella rubella HOM05D007888 ORTHO05D009976 3.6e-16 89.0 150 33.3
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-13 80.1 155 33.5
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.7e-13 79.0 155 32.3
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 3.7e-13 79.0 114 32.5
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 1.4e-12 77.0 108 34.3
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-11 73.6 61 55.7
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-11 73.6 61 55.7
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-11 73.6 61 55.7
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.6e-11 73.6 150 32.0
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.3e-10 70.5 155 30.3
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 3.9e-10 68.9 152 28.3
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 3.9e-10 68.9 168 31.0
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 3.9e-10 68.9 124 29.8
CARHR112790 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.1e-09 67.4 66 40.9
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.9e-09 66.6 156 25.6
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.3e-09 65.9 167 26.3
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.3e-09 65.5 166 30.1
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 5.6e-09 65.1 155 28.4
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 5.6e-09 65.1 110 33.6
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 9.5e-09 64.3 153 28.8
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.2e-08 63.9 143 30.1
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.6e-08 63.5 169 29.6
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.8e-08 62.8 161 28.6
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.6e-08 62.4 151 31.1
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 8.1e-08 61.2 157 28.0
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.4e-07 60.5 153 31.4
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 2.3e-07 59.7 129 29.5
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 2.3e-07 59.7 159 24.5
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.8e-07 58.2 160 26.9
THA.LOC104824530 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 8.9e-07 57.8 150 26.7


User provided reference genes

Program Settings