Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.4e-123 445.7 246 100.0
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 7.9e-103 377.5 247 88.3
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 3.8e-97 358.6 246 84.1
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 2.5e-96 355.9 246 83.3
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 9.4e-96 354.0 246 83.3
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 9.4e-96 354.0 251 81.7
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 4.7e-95 351.7 247 83.4
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 4.7e-95 351.7 247 83.4
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 3.0e-94 349.0 248 83.9
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 8.8e-94 347.4 247 82.2
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 1.3e-92 343.6 246 81.7
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 1.3e-92 343.6 246 81.7
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 4.8e-92 341.7 246 80.9
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.8e-91 339.7 247 81.8
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.5e-88 329.3 248 77.8
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 2.2e-84 316.2 246 77.2
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 2.4e-83 312.8 250 74.8
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 4.1e-83 312.0 246 77.2
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 3.2e-80 302.4 253 73.9
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 4.0e-78 295.4 273 70.0
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 7.2e-72 274.6 242 68.2
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 9.8e-61 237.7 232 59.1
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 6.4e-60 235.0 235 58.3
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 5.0e-57 225.3 244 56.6
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 1.1e-56 224.2 250 56.8
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.9e-56 223.4 242 54.5
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.9e-56 223.4 242 54.1
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 3.3e-56 222.6 242 53.7
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 4.3e-56 222.2 223 59.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 5.6e-56 221.9 229 58.5
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 5.6e-56 221.9 234 56.0
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 9.5e-56 221.1 246 56.1
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.2e-55 220.7 234 58.1
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.2e-55 220.7 226 56.6
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.1e-55 219.9 245 55.9
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 2.1e-55 219.9 246 56.5
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.8e-55 219.5 232 56.9
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.2e-55 218.4 237 57.0
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 8.0e-55 218.0 237 57.0
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 1.0e-54 217.6 228 57.5
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.0e-54 217.6 243 55.6
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.0e-54 215.7 231 59.3
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 6.8e-54 214.9 234 54.7
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 6.8e-54 214.9 244 53.3
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 8.9e-54 214.5 243 56.8
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 1.2e-53 214.2 226 58.0
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.5e-53 213.8 249 55.0
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 4.4e-53 212.2 246 54.5
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 4.4e-53 212.2 245 52.2
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 4.4e-53 212.2 242 55.0
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 4.4e-53 212.2 245 54.3
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 4.4e-53 212.2 249 51.8
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 7.5e-53 211.5 251 55.0
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.3e-52 210.7 245 53.5
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.3e-52 210.7 223 56.5
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.7e-52 210.3 233 57.1
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.7e-52 210.3 234 55.6
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 2.9e-52 209.5 240 52.9
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 2.9e-52 209.5 250 54.4
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.1e-51 207.6 199 61.8
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.1e-51 205.7 229 55.9
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 4.1e-51 205.7 234 56.0
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 4.1e-51 205.7 223 56.1
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 4.1e-51 205.7 239 53.6
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 5.4e-51 205.3 241 53.1
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 7.0e-51 204.9 240 55.8
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 9.2e-51 204.5 236 54.2
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 2.0e-50 203.4 242 54.1
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.5e-50 202.6 224 55.8
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 3.5e-50 202.6 199 62.8
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 4.6e-50 202.2 245 52.2
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 7.8e-50 201.4 234 53.8
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.7e-49 200.3 252 52.0
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.3e-49 199.9 250 50.8
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 5.0e-49 198.7 250 49.2
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 8.6e-49 198.0 163 69.3
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.5e-48 197.2 248 52.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 7.3e-48 194.9 215 55.8
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 9.5e-48 194.5 264 48.1
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 9.5e-48 194.5 264 48.1
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 9.5e-48 194.5 264 48.1
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 2.1e-47 193.4 238 50.0
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 2.1e-47 193.4 231 52.4
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 3.6e-47 192.6 234 53.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 3.6e-47 192.6 232 53.4
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 2.3e-46 189.9 246 49.6
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 3.1e-46 189.5 233 53.2
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.2e-45 187.6 233 51.5
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.2e-45 187.6 230 51.7
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.5e-45 187.2 243 49.8
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 2.0e-45 186.8 227 49.8
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.0e-45 186.8 250 50.8
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 7.5e-45 184.9 224 52.2
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.2e-44 183.3 244 49.2
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 2.2e-44 183.3 227 49.3
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 3.7e-44 182.6 230 48.7
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 4.9e-44 182.2 226 49.6
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.9e-43 180.3 165 65.5
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 3.2e-43 179.5 226 50.4
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 2.7e-42 176.4 232 47.4
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 4.6e-42 175.6 233 47.6
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 3.9e-41 172.6 222 49.5
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 5.1e-41 172.2 226 49.1
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 8.6e-41 171.4 230 48.3
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 3.3e-40 169.5 232 48.3
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 4.3e-40 169.1 222 48.6
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 5.6e-40 168.7 250 49.2
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 9.5e-40 167.9 255 46.3
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 2.4e-35 153.3 123 65.9
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 2.1e-34 150.2 245 41.6
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.5e-34 149.4 121 66.9
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 7.8e-34 148.3 121 67.8
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 1.3e-33 147.5 237 41.4
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 9.9e-29 131.3 158 49.4
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.0e-25 121.3 123 59.3
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.9e-24 117.1 132 51.5
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.6e-23 114.0 164 47.6
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 2.4e-22 110.2 132 48.5
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 2.4e-22 110.2 277 32.5
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 4.0e-22 109.4 129 52.7
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 2.9e-20 103.2 230 36.1
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.6e-13 80.1 184 32.1
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 2.2e-12 77.0 90 61.1
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 1.3e-07 61.2 115 34.8
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 1.8e-06 57.4 157 33.1


User provided reference genes

Program Settings