Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g19880 Schrenkiella parvula HOM05D006070 ORTHO05D009119 3.4e-118 428.3 216 100.0
A06p38550 Brassica napus HOM05D006070 ORTHO05D009119 2.1e-54 216.5 238 53.8
BcaNung02584 Brassica carinata HOM05D006070 ORTHO05D009119 1.3e-53 213.8 240 54.6
C07p39720 Brassica napus HOM05D006070 ORTHO05D009119 1.3e-53 213.8 240 54.6
BcaC06g30712 Brassica carinata HOM05D006070 ORTHO05D009119 1.6e-51 206.8 240 52.9
BraA06t26769Z Brassica rapa HOM05D006070 ORTHO05D009119 3.6e-51 205.7 218 56.0
BraA06t26740Z Brassica rapa HOM05D006070 ORTHO05D009119 1.9e-47 193.4 223 53.8
BolC7t44531H Brassica oleracea HOM05D006070 ORTHO05D009119 4.1e-47 192.2 215 53.0
A06p38250 Brassica napus HOM05D006070 ORTHO05D009119 2.7e-46 189.5 223 53.4
Thhalv10029235m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 3.5e-46 189.1 220 52.7
Carub.0008s0896 Capsella rubella HOM05D006070 ORTHO05D009119 1.5e-44 183.7 244 46.3
Thhalv10029256m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.5e-44 183.7 274 47.1
C07p39980 Brassica napus HOM05D006070 ORTHO05D009119 4.7e-43 178.7 208 51.4
Thhalv10029380m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.1e-42 177.6 232 51.3
BolC7t44495H Brassica oleracea HOM05D006070 ORTHO05D009119 6.9e-42 174.9 225 51.1
AT5G38620 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 8.9e-42 174.5 235 47.2
Sp2g19510 Schrenkiella parvula HOM05D006070 ORTHO05D009119 3.2e-39 166.0 209 53.1
CARHR058390 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.6e-35 153.7 215 47.0
Sp6g07320 Schrenkiella parvula HOM05D006070 ORTHO05D009119 8.1e-35 151.4 202 48.5
CARHR116680 Cardamine hirsuta HOM05D006070 ORTHO05D009119 2.4e-34 149.8 218 46.3
AT5G49420 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.0e-34 149.1 246 41.1
CARHR059500 Cardamine hirsuta HOM05D006070 ORTHO05D009119 6.9e-34 148.3 221 45.7
BcaC02g09349 Brassica carinata HOM05D006070 ORTHO05D016789 3.0e-29 132.9 217 39.2
BolC4t25721H Brassica oleracea HOM05D006070 ORTHO05D016789 8.7e-29 131.3 218 39.4
C04p41630 Brassica napus HOM05D006070 ORTHO05D016789 5.6e-28 128.6 218 38.5
C04p41420 Brassica napus HOM05D006070 ORTHO05D016789 2.1e-27 126.7 218 39.0
Sp6g06330 Schrenkiella parvula HOM05D006070 ORTHO05D009119 4.8e-27 125.6 149 51.0
BolC4t25742H Brassica oleracea HOM05D006070 ORTHO05D016789 1.8e-26 123.6 175 41.7
AT5G49490 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.0e-26 122.5 159 44.0
BcaB04g17293 Brassica carinata HOM05D006070 ORTHO05D009119 3.4e-25 119.4 206 37.9
A04p07750 Brassica napus HOM05D006070 ORTHO05D016789 1.3e-24 117.5 102 59.8
BraA04t16467Z Brassica rapa HOM05D006070 ORTHO05D016789 2.9e-24 116.3 102 58.8
BcaC07g37029 Brassica carinata HOM05D006070 ORTHO05D009119 1.9e-23 113.6 163 42.3
BolC8t47189H Brassica oleracea HOM05D006070 ORTHO05D009119 1.9e-23 113.6 163 42.3
Thhalv10015623m.g Eutrema salsugineum HOM05D006070 ORTHO05D020096 7.1e-23 111.7 200 40.0
BraA08t32408Z Brassica rapa HOM05D006070 ORTHO05D009119 1.6e-22 110.5 164 41.5
BraA04t16485Z Brassica rapa HOM05D006070 ORTHO05D016789 2.7e-22 109.8 99 57.6
Carub.0007s2769 Capsella rubella HOM05D006070 ORTHO05D009119 3.5e-22 109.4 218 37.6
CARHR293630 Cardamine hirsuta HOM05D006070 ORTHO05D009119 4.6e-22 109.0 100 60.0
BcaB04g17295 Brassica carinata HOM05D006070 ORTHO05D009119 1.0e-21 107.8 141 43.3
Sp1g36460 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.0e-21 107.8 77 68.8
BcaB04g17320 Brassica carinata HOM05D006070 ORTHO05D009119 1.3e-21 107.5 213 34.7
C06p02990 Brassica napus HOM05D006070 ORTHO05D009119 1.8e-21 107.1 218 34.9
BolC6t35422H Brassica oleracea HOM05D006070 ORTHO05D009119 1.8e-21 107.1 218 34.9
BraA08t32389Z Brassica rapa HOM05D006070 ORTHO05D009119 1.8e-21 107.1 227 34.4
BcaB04g17318 Brassica carinata HOM05D006070 ORTHO05D009119 3.0e-21 106.3 141 43.3
C06p04630 Brassica napus HOM05D006070 ORTHO05D009119 3.9e-21 105.9 204 37.3
BraA06t23652Z Brassica rapa HOM05D006070 ORTHO05D009119 5.1e-21 105.5 104 51.0
C08p03750 Brassica napus HOM05D006070 ORTHO05D009119 8.7e-21 104.8 94 57.4
C08p03960 Brassica napus HOM05D006070 ORTHO05D009119 8.7e-21 104.8 94 57.4
A06p04480 Brassica napus HOM05D006070 ORTHO05D009119 1.1e-20 104.4 105 51.4
A08p03550 Brassica napus HOM05D006070 ORTHO05D009119 1.1e-20 104.4 136 42.6
BcaB07g33759 Brassica carinata HOM05D006070 ORTHO05D009119 1.5e-20 104.0 113 46.0
BcaNung06358 Brassica carinata HOM05D006070 ORTHO05D009119 1.9e-20 103.6 135 42.2
BolC6t35592H Brassica oleracea HOM05D006070 ORTHO05D009119 1.9e-20 103.6 135 42.2
BcaB04g17059 Brassica carinata HOM05D006070 ORTHO05D009119 3.3e-20 102.8 161 37.9
BcaC08g43039 Brassica carinata HOM05D006070 ORTHO05D009119 3.3e-20 102.8 219 35.2
BcaC08g43048 Brassica carinata HOM05D006070 ORTHO05D009119 3.3e-20 102.8 219 35.2
C05p34160 Brassica napus HOM05D006070 ORTHO05D041893 5.6e-20 102.1 91 53.8
BolC5t32150H Brassica oleracea HOM05D006070 ORTHO05D041893 5.6e-20 102.1 91 53.8
CARHR186430 Cardamine hirsuta HOM05D006070 ORTHO05D009119 9.6e-20 101.3 195 37.4
BcaB07g33746 Brassica carinata HOM05D006070 ORTHO05D009119 1.6e-19 100.5 100 50.0
C06p03100 Brassica napus HOM05D006070 ORTHO05D009119 2.8e-19 99.8 115 47.0
BolC6t35429H Brassica oleracea HOM05D006070 ORTHO05D009119 2.8e-19 99.8 115 47.0
BcaB07g33520 Brassica carinata HOM05D006070 ORTHO05D009119 6.2e-19 98.6 113 44.2
A08p03790 Brassica napus HOM05D006070 ORTHO05D009119 8.1e-19 98.2 225 34.2
BcaC06g32177 Brassica carinata HOM05D006070 ORTHO05D020096 3.1e-18 96.3 202 36.6
A10p31460 Brassica napus HOM05D006070 ORTHO05D020096 3.4e-17 92.8 200 37.5
BraA10t45192Z Brassica rapa HOM05D006070 ORTHO05D020096 3.4e-17 92.8 200 37.5
C09p72150 Brassica napus HOM05D006070 ORTHO05D020096 1.3e-16 90.9 91 53.8
BolC9t59959H Brassica oleracea HOM05D006070 ORTHO05D020096 1.3e-16 90.9 91 53.8
Carub.0002s1331 Capsella rubella HOM05D006070 ORTHO05D009119 1.7e-16 90.5 197 35.5
CARHR221010 Cardamine hirsuta HOM05D006070 ORTHO05D009119 2.5e-15 86.7 145 40.7
CARHR283580 Cardamine hirsuta HOM05D006070 ORTHO05D009119 4.2e-15 85.9 92 53.3
Carub.0004s0822 Capsella rubella HOM05D006070 ORTHO05D009119 7.1e-15 85.1 177 36.2
Thhalv10023813m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 9.3e-15 84.7 91 52.7
BcaC04g22285 Brassica carinata HOM05D006070 ORTHO05D009119 1.2e-14 84.3 91 49.5
C09p21210 Brassica napus HOM05D006070 ORTHO05D009119 1.2e-14 84.3 91 49.5
BcaB07g31239 Brassica carinata HOM05D006070 ORTHO05D009119 2.1e-14 83.6 91 49.5
Carub.0002s1330 Capsella rubella HOM05D006070 ORTHO05D009119 3.5e-14 82.8 164 39.0
AT1G46408 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 6.0e-14 82.0 231 33.3
Sp5g22450 Schrenkiella parvula HOM05D006070 ORTHO05D020096 6.0e-14 82.0 142 41.5
Thhalv10023175m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 1.0e-13 81.3 91 50.5
AL6G14270 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 3.0e-13 79.7 195 35.9
BcaC02g09331 Brassica carinata HOM05D006070 ORTHO05D016789 3.0e-13 79.7 61 63.9
A09p17140 Brassica napus HOM05D006070 ORTHO05D009119 3.0e-13 79.7 91 48.4
BraA09t37345Z Brassica rapa HOM05D006070 ORTHO05D009119 3.0e-13 79.7 91 48.4
AL2G15620 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 3.9e-13 79.3 91 48.4
BolC9t55023H Brassica oleracea HOM05D006070 ORTHO05D009119 3.9e-13 79.3 91 48.4
Thhalv10023871m.g Eutrema salsugineum HOM05D006070 ORTHO05D009119 5.1e-13 79.0 91 51.6
AT5G04640 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 1.5e-12 77.4 239 28.9
Sp2g03770 Schrenkiella parvula HOM05D006070 ORTHO05D009119 1.5e-12 77.4 91 48.4
Carub.0002s0441 Capsella rubella HOM05D006070 ORTHO05D009119 4.3e-12 75.9 161 34.8
AL2G15570 Arabidopsis lyrata HOM05D006070 ORTHO05D009119 7.4e-12 75.1 91 46.2
THA.LOC104819503 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 7.4e-12 75.1 91 46.2
THA.LOC104819512 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 7.4e-12 75.1 91 46.2
Sp2g03710 Schrenkiella parvula HOM05D006070 ORTHO05D009119 3.7e-11 72.8 91 46.2
AT1G60920 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 4.8e-11 72.4 94 44.7
AT1G60880 Arabidopsis thaliana HOM05D006070 ORTHO05D009119 6.3e-11 72.0 91 47.3
BcaC04g22292 Brassica carinata HOM05D006070 ORTHO05D009119 3.1e-10 69.7 91 45.1
C09p21070 Brassica napus HOM05D006070 ORTHO05D009119 3.1e-10 69.7 91 45.1
BolC9t55008H Brassica oleracea HOM05D006070 ORTHO05D009119 3.1e-10 69.7 91 45.1
Carub.0002s0435 Capsella rubella HOM05D006070 ORTHO05D009119 6.9e-10 68.6 91 44.0
A09p17040 Brassica napus HOM05D006070 ORTHO05D009119 4.5e-09 65.9 91 44.0
BraA09t37339Z Brassica rapa HOM05D006070 ORTHO05D009119 4.5e-09 65.9 91 44.0
THA.LOC104820177 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 3.8e-08 62.8 116 37.1
THA.LOC104810603 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 5.0e-08 62.4 129 38.0
THA.LOC104810604 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 5.0e-08 62.4 129 38.0
THA.LOC104810605 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 5.0e-08 62.4 129 38.0
THA.LOC109116026 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 5.0e-08 62.4 129 38.0
CARHR285170 Cardamine hirsuta HOM05D006070 ORTHO05D009119 1.1e-07 61.2 92 42.4
THA.LOC104819459 Tarenaya hassleriana HOM05D006070 ORTHO05D009119 1.9e-07 60.5 103 38.8
AT3G12510 Arabidopsis thaliana HOM05D014968 ORTHO05D014061 5.5e-07 58.9 112 36.6
BolC8t47175H Brassica oleracea HOM05D006070 ORTHO05D009119 1.2e-06 57.8 39 71.8
BcaB04g21072 Brassica carinata HOM05D014968 ORTHO05D014061 1.6e-06 57.4 94 37.2
BcaC09g48251 Brassica carinata HOM05D014968 ORTHO05D014061 3.6e-06 56.2 90 34.4
C01p52650 Brassica napus HOM05D014968 ORTHO05D014061 3.6e-06 56.2 90 34.4
BolC1t05205H Brassica oleracea HOM05D014968 ORTHO05D014061 3.6e-06 56.2 90 34.4
Thhalv10022424m.g Eutrema salsugineum HOM05D014968 ORTHO05D014061 7.9e-06 55.1 111 35.1


User provided reference genes

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