Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 9.9e-56 219.9 115 100.0
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 2.9e-55 218.4 115 99.1
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.4e-54 216.1 115 97.4
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 3.2e-54 214.9 115 97.4
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 4.2e-54 214.5 115 97.4
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 4.2e-54 214.5 115 97.4
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 4.2e-54 214.5 115 97.4
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 4.2e-54 214.5 115 97.4
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 7.1e-54 213.8 115 96.5
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 9.3e-54 213.4 115 95.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.2e-53 213.0 115 96.5
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.1e-51 206.5 116 94.0
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.8e-49 199.1 110 93.6
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.5e-48 196.1 114 85.1
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 7.6e-48 193.7 111 91.9
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 1.4e-46 189.5 108 88.0
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.1e-43 179.9 114 79.8
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 1.1e-41 173.3 114 74.6
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 5.3e-41 171.0 104 88.5
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 9.0e-41 170.2 112 77.7
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.6e-40 168.7 114 72.8
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-39 166.4 115 69.6
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-39 166.4 115 67.8
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 1.7e-39 166.0 114 74.6
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.7e-39 166.0 114 71.1
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 3.8e-39 164.9 113 73.5
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 3.8e-39 164.9 114 71.1
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 4.9e-39 164.5 114 71.1
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.9e-38 162.5 115 72.2
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 1.9e-38 162.5 113 69.0
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.4e-38 162.2 115 71.3
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.4e-38 162.2 113 71.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 71.9
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 71.1
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.2e-38 161.8 114 69.3
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 5.5e-38 161.0 113 70.8
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 7.1e-38 160.6 113 70.8
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 7.1e-38 160.6 114 71.1
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.3e-38 160.2 113 69.9
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 9.3e-38 160.2 114 72.8
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 9.3e-38 160.2 113 70.8
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.1e-37 159.1 114 72.8
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 2.1e-37 159.1 114 72.8
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 2.7e-37 158.7 114 70.2
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 3.5e-37 158.3 111 69.4
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.5e-37 158.3 113 69.0
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.5e-37 158.3 113 69.0
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 4.6e-37 157.9 114 71.1
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 6.0e-37 157.5 113 69.9
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 69.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 6.0e-37 157.5 113 66.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 6.0e-37 157.5 114 70.2
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 7.9e-37 157.1 114 69.3
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 7.9e-37 157.1 113 68.1
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 7.9e-37 157.1 113 64.6
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.3e-36 156.4 113 69.0
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.8e-36 156.0 112 69.6
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.8e-36 156.0 114 69.3
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.8e-36 156.0 115 68.7
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 3.0e-36 155.2 113 65.5
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.0e-36 155.2 113 63.7
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 3.0e-36 155.2 113 69.9
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 5.1e-36 154.5 106 70.8
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 5.1e-36 154.5 114 69.3
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 8.7e-36 153.7 113 67.3
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 8.7e-36 153.7 113 66.4
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 8.7e-36 153.7 113 69.0
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 8.7e-36 153.7 114 68.4
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.7e-36 153.7 112 71.4
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.5e-35 152.9 113 63.7
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.5e-35 152.9 114 67.5
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.9e-35 152.5 107 70.1
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 2.5e-35 152.1 107 68.2
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.5e-35 152.1 111 65.8
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 7.4e-35 150.6 104 74.0
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.6e-34 149.4 113 67.3
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.1e-34 149.1 112 68.8
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.1e-34 149.1 105 69.5
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 4.8e-34 147.9 106 70.8
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 4.8e-34 147.9 101 74.3
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 8.1e-34 147.1 106 65.1
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 1.1e-33 146.7 105 69.5
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.1e-33 146.7 111 64.0
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.4e-33 146.4 110 61.8
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.8e-33 146.0 101 73.3
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 5.3e-33 144.4 138 56.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 5.3e-33 144.4 114 66.7
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.2e-32 143.3 113 65.5
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 3.4e-32 141.7 102 67.6
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 4.5e-32 141.4 107 67.3
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.3e-31 139.8 114 65.8
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.2e-31 139.0 106 66.0
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 2.9e-31 138.7 102 65.7
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 6.5e-31 137.5 107 64.5
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 8.4e-31 137.1 96 69.8
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 68.7
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.1e-30 136.7 103 68.0
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.4e-30 136.3 95 70.5
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.2e-30 135.2 101 67.3
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 4.2e-30 134.8 102 69.6
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 7.1e-30 134.0 95 69.5
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 7.1e-30 134.0 96 68.8
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 9.3e-30 133.7 95 69.5
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 4.6e-29 131.3 97 68.0
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.6e-29 131.3 97 70.1
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 7.9e-29 130.6 105 64.8
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 1.0e-28 130.2 89 75.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.3e-28 129.8 91 71.4
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.8e-28 129.4 97 66.0
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 3.9e-28 128.3 111 55.9
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 6.7e-28 127.5 94 66.0
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 8.7e-28 127.1 106 64.2
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.1e-27 126.7 97 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.9e-27 125.9 102 59.8
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.9e-27 125.9 97 64.9
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 1.9e-27 125.9 94 60.6
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.3e-27 125.2 102 64.7
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.3e-27 124.8 89 69.7
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 7.4e-27 124.0 101 60.4
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 3.7e-26 121.7 101 58.4
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 8.2e-26 120.6 98 62.2
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 2.4e-25 119.0 118 54.2
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 2.4e-25 119.0 97 61.9
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 6.9e-25 117.5 96 63.5
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.0e-24 115.9 98 62.2
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.7e-23 112.8 93 60.2
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.3e-20 102.4 75 70.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 6.7e-20 100.9 111 45.0
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.8e-18 95.5 100 52.0
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.4e-16 88.6 66 68.2
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.7e-15 86.3 79 55.7
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.4e-14 83.2 105 53.3
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.4e-14 83.2 56 73.2
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.3e-12 75.9 109 39.4
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.1e-11 73.6 66 57.6
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 4.1e-09 65.1 94 37.2
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 4.1e-09 65.1 95 38.9
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 3.4e-08 62.0 54 61.1
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.4e-08 62.0 52 57.7


User provided reference genes

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